RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CYLC2Q14093 348 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ABRAXAS2Q15018 415 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TPSAB1Q15661 275 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ZIC1Q15915 447 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 MS4A13Q5J8X5 152 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 LEMD1Q68G75 181 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 EMBQ6PCB8 327 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 UQCC3Q6UW78 93 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TIPARPQ7Z3E1 657 aaKnown RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 HSD11B1LQ7Z5J1 315 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CDH26Q8IXH8 852 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CLEC4FQ8N1N0 589 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ANKFN1Q8N957 763 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 STEAP2Q8NFT2 490 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 OR51G2Q8NGK0 314 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TRMT10AQ8TBZ6 339 aaKnown RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 RNF139Q8WU17 664 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 FAM222BQ8WU58 562 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 SPRYD4Q8WW59 207 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 RASL10AQ92737 203 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NTNG2Q96CW9 530 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 C11orf24Q96F05 449 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ZBTB18Q99592 522 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 PYGO2Q9BRQ0 406 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TCHPQ9BT92 498 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 COMMD4Q9H0A8 199 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 IKZF5Q9H5V7 419 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 LRRC40Q9H9A6 602 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 GNB4Q9HAV0 340 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 FANCFQ9NPI8 374 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC2A6Q9UGQ3 507 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NTNG1Q9Y2I2 539 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 DHRS7Q9Y394 339 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CSAG2Q9Y5P2 127 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 MAD1L1Q9Y6D9 718 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TDRD15B5MCY1 1934 aaKnown RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CARMIL1Q5VZK9 1371 aa2.59□□□□□ -2
SHCBP1-202ENST00000563219 BCLAF3A2AJT9 711 aaKnown RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 BTBD17A6NE02 478 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 G3V4G9 280 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 AP3B1O00203 1094 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ARPC3O15145 178 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 LRATO95237 230 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SEMA4FO95754 770 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 HCKP08631 526 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 NT5EP21589 574 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 HMGB2P26583 209 aaKnown RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 LAP3P28838 519 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ACVR1BP36896 505 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 PGFP49763 221 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 LIM2P55344 173 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 IL9RQ01113 521 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 OC90Q02509 493 aaPredicted RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 FGL1Q08830 312 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 LRRC74AQ0VAA2 488 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ATXN7L3Q14CW9 347 aaPredicted RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 SYPL1Q16563 259 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 REP15Q6BDI9 236 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ARMCX5Q6P1M9 558 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 RFWD3Q6PCD5 774 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 CCDC80Q76M96 950 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SLC47A2Q86VL8 602 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SLC22A9Q8IVM8 553 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 MCOLN2Q8IZK6 566 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ZSCAN4Q8NAM6 433 aaPredicted RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 OR13C2Q8NGS9 318 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 AKR7LQ8NHP1 331 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 CRYGNQ8WXF5 182 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 TUBGCP3Q96CW5 907 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SH3YL1Q96HL8 342 aaPredicted RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 AMDHD1Q96NU7 426 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SOSTQ9BQB4 213 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 TMEM43Q9BTV4 400 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ADNPQ9H2P0 1102 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 PNNQ9H307 717 aaKnown RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 HEXA-AS1Q9H8Q6 139 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 JPT2Q9H910 190 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 POLD4Q9HCU8 107 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 POLE4Q9NR33 117 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SLC17A5Q9NRA2 495 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ABCC13Q9NSE7 274 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ARMCX1Q9P291 453 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 EXTL2Q9UBQ6 330 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SPATA2Q9UM82 520 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 BARX2Q9UMQ3 279 aaPredicted RBP2.58□□□□□ -2
SHCBP1-202ENST00000563219 RNF24Q9Y225 148 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 WDR45Q9Y484 360 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 ALG6Q9Y672 507 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 STYXL1Q9Y6J8 313 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 SPACA6W5XKT8 324 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 PTCH1Q13635 1447 aa2.58□□□□□ -2
SHCBP1-202ENST00000563219 MBLAC1A4D2B0 266 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 SAGE2PA6NJ88 616 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 SHISA9B4DS77 424 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 H3BMQ9 156 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PDLIM1O00151 329 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 FOXE1O00358 373 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 TYROBPO43914 113 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 SRPX2O60687 465 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 B4GALT2O60909 372 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms