RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 B4GALT7Q9UBV7 327 aa17.22■□□□□ 0.35
RAB40C-207ENST00000563109 DTNAQ9Y4J8 743 aa17.22■□□□□ 0.35
RAB40C-207ENST00000563109 NPIPB9F8W1W9 429 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 PGM3O95394 542 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ANGPTL1O95841 491 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 DBIP07108 87 aaKnown RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ENDOUP21128 410 aaKnown RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ELAVL4P26378 380 aaKnown RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 PTGDSP41222 190 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 MAPK11Q15759 364 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 VMACQ2NL98 169 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 FAM180AQ6UWF9 173 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 BNC2Q6ZN30 1099 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 MARCH3Q86UD3 253 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 Q8NA96 180 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 OR1J4Q8NGS1 313 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 FBXO27Q8NI29 283 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ZNF607Q96SK3 696 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 SPATA5L1Q9BVQ7 753 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ALG2Q9H553 416 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 PROK2Q9HC23 129 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 ZFP64Q9NPA5 681 aa17.21■□□□□ 0.35
RAB40C-207ENST00000563109 TUBA8Q9NY65 449 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 KMT2BQ9UMN6 2715 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-207ENST00000563109 DSPPQ9NZW4 1301 aa17.21■□□□□ 0.34
RAB40C-207ENST00000563109 CNTRLQ7Z7A1 2325 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 AGAP5A6NIR3 686 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 SNPHO15079 494 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 TRIM3O75382 744 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 UGT2B17O75795 530 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 PDE9AO76083 593 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 SORBS2O94875 1100 aaKnown RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 CRYABP02511 175 aaKnown RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 GZMMP51124 257 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 PMP22Q01453 160 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 C17orf67Q0P5P2 114 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 LIN52Q52LA3 116 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 KLHL26Q53HC5 615 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 SAMD4BQ5PRF9 694 aaKnown RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 AP1ARQ63HQ0 302 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 C6orf89Q6UWU4 347 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 RINLQ6ZS11 566 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 MICU2Q8IYU8 434 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 GATSQ8NAP1 163 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 ZFP62Q8NB50 900 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 TNIP2Q8NFZ5 429 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 PHOSPHO1Q8TCT1 267 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF583Q96ND8 569 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 FRMD6Q96NE9 622 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 KCTD14Q9BQ13 255 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 QRSL1Q9H0R6 528 aaKnown RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 C1orf21Q9H246 121 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-207ENST00000563109 TMEM181Q9P2C4 612 aa17.2■□□□□ 0.34
RAB40C-207ENST00000563109 ELOVL7A1L3X0 281 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 PINLYPA6NC86 204 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 C2orf72A6NCS6 295 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 SERINC4A6NH21 518 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 GTPBP1O00178 669 aaKnown RBP17.19■□□□□ 0.34
RAB40C-207ENST00000563109 EBAG9O00559 213 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 GNB5O14775 395 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 GSTA4O15217 222 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 ATP5HO75947 161 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 ETS2P15036 469 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 IL7RP16871 459 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF24P17028 368 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 AQP1P29972 269 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 CPOXP36551 454 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 GSK3BP49841 420 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 RASSF2P50749 326 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 GAS1P54826 345 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
RAB40C-207ENST00000563109 COLEC12Q5KU26 742 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 APOOLQ6UXV4 268 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 EIF3MQ7L2H7 374 aaKnown RBP17.19■□□□□ 0.34
RAB40C-207ENST00000563109 PATL1Q86TB9 770 aaKnown RBP17.19■□□□□ 0.34
RAB40C-207ENST00000563109 SLC22A16Q86VW1 577 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 OR4K17Q8NGC6 315 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 TTTY12Q9BZ98 90 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 SLC35A3Q9Y2D2 325 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 IFT52Q9Y366 437 aa17.19■□□□□ 0.34
RAB40C-207ENST00000563109 TTLL8A6PVC2 850 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 TFECO14948 347 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-207ENST00000563109 SERPINB7O75635 380 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 CSTAP01040 98 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 THBS1P07996 1170 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 UBL4AP11441 157 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 RPS4Y1P22090 263 aaKnown RBP17.18■□□□□ 0.34
RAB40C-207ENST00000563109 RFC3P40938 356 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 RNF144AP50876 292 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-207ENST00000563109 BNIP1Q12981 228 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 VEZF1Q14119 521 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 FGFBP1Q14512 234 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 MAPK14Q16539 360 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 SPATS1Q496A3 300 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 DNAL1Q4LDG9 190 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms