RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 SLC41A2Q96JW4 573 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 PRSS27Q9BQR3 290 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 CNPPD1Q9BV87 410 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 TSSK6Q9BXA6 273 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 EGLN3Q9H6Z9 239 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 TMEM27Q9HBJ8 222 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 MED17Q9NVC6 651 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 FBXO34Q9NWN3 711 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 CNIH4Q9P003 139 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 KLHL3Q9UH77 587 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 NUP210LQ5VU65 1888 aa11.72□□□□□ -0.53
AC055717.2-201ENST00000561864 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 THADAQ6YHU6 1953 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NPIPA5A0A0B4J1W7 369 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 KDM4EB2RXH2 506 aaPredicted RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NPIPA7E9PJI5 369 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NPIPB9F8W1W9 429 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 M0R3G1 203 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 INHBBP09529 407 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 GIMD1P0DJR0 217 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NPIPA8P0DM63 369 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 PRG2P13727 222 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 MAOAP21397 527 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SSTR4P31391 388 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 CSF2RBP32927 897 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 UGT2B10P36537 528 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 LIPAP38571 399 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 RBM34P42696 430 aaKnown RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 BTG2P78543 158 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 BNIP3Q12983 259 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 DSG2Q14126 1118 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SNAPC1Q16533 368 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 DGUOKQ16854 277 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SYT16Q17RD7 645 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 TIMM50Q3ZCQ8 353 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SYT14P1Q58G82 188 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 ACSM5Q6NUN0 579 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 RPL13AP3Q6NVV1 102 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NPSR1Q6W5P4 371 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 ZNF550Q7Z398 422 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 WDR5BQ86VZ2 330 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 NRMQ8IXM6 262 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 OR8D4Q8NGM9 314 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 BRIX1Q8TDN6 353 aaKnown RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 TMEM255BQ8WV15 326 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 BORCS5Q969J3 196 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 HS6ST2Q96MM7 605 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 PLA2G12AQ9BZM1 189 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 TRIM2Q9C040 744 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 OR10A5Q9H207 317 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 DSN1Q9H410 356 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 LANCL2Q9NS86 450 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 IL20Q9NYY1 176 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 SUSD2Q9UGT4 822 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 ZNF223Q9UK11 482 aaPredicted RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 DIMT1Q9UNQ2 313 aaKnown RBP11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 ERVK-19Q9WJR5 959 aa11.71□□□□□ -0.53
AC055717.2-201ENST00000561864 UNC119BA6NIH7 251 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 EFCAB9A8MZ26 197 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 DSCR3O14972 297 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 TOX3O15405 576 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PRODHO43272 600 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 CHP2O43745 196 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 TLX2O43763 284 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 DYRK3O43781 588 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 AIREO43918 545 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PIP5K1CO60331 668 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 CDC123O75794 336 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 RAB36O95755 333 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 IFNA16P05015 189 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 HMGN1P05114 100 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 RPLP0P05388 317 aaKnown RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PNLIPP16233 465 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 EPHA8P29322 1005 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 GPR4P46093 362 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 CLK1P49759 484 aaKnown RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ATP12AP54707 1039 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 OCA2Q04671 838 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PRKCDQ05655 676 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ERV3-1Q14264 604 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 FGFBP1Q14512 234 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 KCNAB1Q14722 419 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 SHBQ15464 509 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PGGHGQ32M88 737 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 AMZ1Q400G9 498 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 MINDY4Q4G0A6 757 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ARMCX4Q5H9R4 360 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PDZK1Q5T2W1 519 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms