RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MED16Q9Y2X0 877 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ATP23Q9Y6H3 246 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OR2M5A3KFT3 312 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 RTCAO00442 366 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 AKR1B10O60218 316 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 PRKRAO75569 313 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 LYZL6O75951 148 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 TJP3O95049 919 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 CLDN9O95484 217 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 STAMBPO95630 424 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 GPR75O95800 540 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 APRTP07741 180 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 C1GALT1C1LP0DN25 315 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 DDX5P17844 614 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 MDKP21741 143 aaPredicted RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 PTAFRP25105 342 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 CD40P25942 277 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 GSTM2P28161 218 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 FDFT1P37268 417 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SSR2P43308 183 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 NPY2RP49146 381 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 ZNF83P51522 516 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 AP1S2P56377 157 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SNRPD2P62316 118 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 ZBED6P86452 979 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SRSF4Q08170 494 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 MAP4K2Q12851 820 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SLMAPQ14BN4 828 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 MLC1Q15049 377 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.64□□□□□ -1.67
HERC1-213ENST00000561359 AP5B1Q2VPB7 878 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 C6orf163Q5TEZ5 329 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 ZNF470Q6ECI4 717 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 NEPROQ6NW34 567 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 KLHL17Q6TDP4 642 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 TFAP2EQ6VUC0 442 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 C17orf107Q6ZR85 190 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 CCDC103Q8IW40 242 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 GBP7Q8N8V2 638 aaPredicted RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 SRFBP1Q8NEF9 429 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 C17orf47Q8NEP4 570 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 TOR1AIP2Q8NFQ8 470 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 TRIM58Q8NG06 486 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 OR10D3Q8NH80 312 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 MRAPQ8TCY5 172 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 C22orf15Q8WYQ4 148 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 KRT35Q92764 455 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 TBCDQ9BTW9 1192 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 IL22Q9GZX6 179 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 OR10A5Q9H207 317 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 HSD3B7Q9H2F3 369 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 DSN1Q9H410 356 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 CXorf21Q9HAI6 301 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 NTN4Q9HB63 628 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 MYNNQ9NPC7 610 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 FBXO6Q9NRD1 293 aaPredicted RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 ACSS1Q9NUB1 689 aaPredicted RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 INTS10Q9NVR2 710 aaKnown RBP4.64□□□□□ -1.67
HERC1-213ENST00000561359 BFARQ9NZS9 450 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SLC17A6Q9P2U8 582 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 SLC22A14Q9Y267 594 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 AP4B1Q9Y6B7 739 aa4.64□□□□□ -1.67
HERC1-213ENST00000561359 ARFGEF3Q5TH69 2177 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA8QA0A0J9YX86 632 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA8OA6NCC3 632 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GLOD5A6NK44 160 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 WASHC1A8K0Z3 465 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA8NF8WBI6 632 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA8MH3BSY2 632 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA8RI6L899 631 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 M0R1B8 84 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 TIMM23O14925 209 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 SH3BGRLO75368 114 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 REM1O75628 298 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 SLU7O95391 586 aaKnown RBP4.63□□□□□ -1.67
HERC1-213ENST00000561359 TBX6O95947 436 aaPredicted RBP4.63□□□□□ -1.67
HERC1-213ENST00000561359 PNPP00491 289 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 KNG1P01042 644 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 IFNB1P01574 187 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 SCG5P05408 212 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 MSMBP08118 114 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 DAOP14920 347 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GNAZP19086 355 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GGT1P19440 569 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 PGCP20142 388 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GPX3P22352 226 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 HIST1H1TP22492 207 aaPredicted RBP4.63□□□□□ -1.67
HERC1-213ENST00000561359 PRTN3P24158 256 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 GIFP27352 417 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 CETN2P41208 172 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 RASGEF1BQ0VAM2 473 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 SLAMF1Q13291 335 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 THOC5Q13769 683 aaKnown RBP4.63□□□□□ -1.67
HERC1-213ENST00000561359 TRIP10Q15642 601 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 TIMM23BQ5SRD1 257 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 LGSNQ5TDP6 509 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 C18orf63Q68DL7 685 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 LEG1Q6P5S2 330 aa4.63□□□□□ -1.67
HERC1-213ENST00000561359 SSX8Q7RTT4 187 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms