RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 PRSS53Q2L4Q9 553 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 EXOC3L2Q2M3D2 409 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 STAC2Q6ZMT1 411 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 DCAKDQ8WVC6 231 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 PRRG4Q9BZD6 226 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 TBL1XR1Q9BZK7 514 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 C3orf14Q9HBI5 128 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 HHATLQ9HCP6 504 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 GLRX2Q9NS18 164 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 GPR52Q9Y2T5 361 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 WBP11Q9Y2W2 641 aaKnown RBP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 POC1B-GALNT4F8VUJ3 575 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 EIF1AYO14602 144 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 ADAMDEC1O15204 470 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 RGS16O15492 202 aaPredicted RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 DLX3O60479 287 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 ANGPTL1O95841 491 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 PLGP00747 810 aaPredicted RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 SNRPAP09012 282 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 PSMB1P20618 241 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 EIF1AXP47813 144 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 SLC6A8P48029 635 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 PKNOX1P55347 436 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 CTBP2P56545 445 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 KRTAP1-1Q07627 177 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 LCP2Q13094 533 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 TNK1Q13470 666 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 LGSNQ5TDP6 509 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 FAM71E1Q6IPT2 247 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 ADAM5Q6NVV9 412 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM107Q6UX40 140 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 APOOLQ6UXV4 268 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 LCA5Q86VQ0 697 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 WDR75Q8IWA0 830 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 CNPY4Q8N129 248 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 TLCD1Q96CP7 247 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 ELP4Q96EB1 424 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 PLPPR2Q96GM1 343 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM237Q96Q45 408 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 EBPLQ9BY08 206 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 GLIPR2Q9H4G4 154 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 DDX18Q9NVP1 670 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM216Q9P0N5 145 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 MCTS1Q9ULC4 181 aaKnown RBP10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 RTTNQ86VV8 2226 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 ROS1P08922 2347 aa10.59□□□□□ -0.71
CARMIL3-204ENST00000561354 USF3Q68DE3 2245 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 A0A087WUV0 522 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 A0A087WZY1 265 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 C7orf72A4D263 438 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 KCNH1O95259 989 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 UTS2O95399 124 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 PLAUP00749 431 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 ATP5F1P24539 256 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 NTSP30990 170 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 GABRA3P34903 492 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 PRKAA2P54646 552 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 GYS2P54840 703 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 BTKQ06187 659 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 ETFDHQ16134 617 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 CTU2Q2VPK5 515 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 HEPHL1Q6MZM0 1159 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 TIFABQ6ZNK6 161 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 STK32CQ86UX6 486 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 WFDC8Q8IUA0 241 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 GTPBP8Q8N3Z3 284 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 OR10D3Q8NH80 312 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 OR2W6PQ8NHA6 318 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 HOXB13Q92826 284 aaPredicted RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 L3HYPDHQ96EM0 354 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 ADGRG7Q96K78 797 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 AMDHD1Q96NU7 426 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 CENPHQ9H3R5 247 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 MYNNQ9NPC7 610 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 VDAC3Q9Y277 283 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
CARMIL3-204ENST00000561354 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 OVOL3O00110 214 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 SYNGR4O95473 234 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 NGFRP08138 427 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 PSMA4P25789 261 aaKnown RBP10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 MAP3K8P41279 467 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 RFX3P48380 749 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 RAC1P63000 192 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 GRAMD1BQ3KR37 738 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 SPDYAQ5MJ70 313 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 GTF2IRD2BQ6EKJ0 949 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 PPP4R4Q6NUP7 873 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 ESPNLQ6ZVH7 1005 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms