RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TRIM64CA6NLI5 447 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CLDN24A6NM45 220 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CPSF4LA6NMK7 179 aaKnown RBP15.81■□□□□ 0.12
HDDC3-206ENST00000561036 NPIPA7E9PJI5 369 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 NPIPA8P0DM63 369 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CCL4P13236 92 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CYP4B1P13584 511 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 OSMP13725 252 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 GSTM3P21266 225 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 GGT2P36268 569 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ADH7P40394 386 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 RFX3P48380 749 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 GPR143P51810 404 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 RAB15P59190 212 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CXCR4P61073 352 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ALDH6A1Q02252 535 aaKnown RBP15.81■□□□□ 0.12
HDDC3-206ENST00000561036 CD47Q08722 323 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 C1orf94Q6P1W5 598 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF613Q6PF04 617 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 KLHL17Q6TDP4 642 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF550Q7Z398 422 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF440Q8IYI8 595 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF527Q8NB42 609 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ADAMTS16Q8TE57 1224 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 GTPBP3Q969Y2 492 aaKnown RBP15.81■□□□□ 0.12
HDDC3-206ENST00000561036 SLC41A3Q96GZ6 507 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 SPSB2Q99619 263 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 ZPBPQ9BS86 351 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 SEMA4CQ9C0C4 833 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 WWTR1Q9GZV5 400 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 NXF5Q9H1B4 397 aaKnown RBP15.81■□□□□ 0.12
HDDC3-206ENST00000561036 UBQLN4Q9NRR5 601 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 GPN3Q9UHW5 284 aaPredicted RBP15.81■□□□□ 0.12
HDDC3-206ENST00000561036 BLOC1S6Q9UL45 172 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 SLC35A3Q9Y2D2 325 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 SAGE2PA6NJ88 616 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TNFRSF10AO00220 468 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 RFPL3O75679 317 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 CD63P08962 238 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 CCDC159P0C7I6 412 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 SLC5A2P31639 672 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 RPL5P46777 297 aaKnown RBP15.8■□□□□ 0.12
HDDC3-206ENST00000561036 NR1H2P55055 460 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 IL5RAQ01344 420 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TEKQ02763 1124 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 CSRP2Q16527 193 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 KLHL26Q53HC5 615 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 CDCP2Q5VXM1 449 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TMEM205Q6UW68 189 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF730Q6ZMV8 503 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 LANCL3Q6ZV70 420 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 GDF7Q7Z4P5 450 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 C9orf40Q8IXQ3 194 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 DEPDC4Q8N2C3 294 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF441Q8N8Z8 693 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 NFAM1Q8NET5 270 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-206ENST00000561036 B3GNT7Q8NFL0 401 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 GNPDA2Q8TDQ7 276 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 ACOT11Q8WXI4 607 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-206ENST00000561036 CNOT9Q92600 299 aaKnown RBP15.8■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF566Q969W8 418 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TP53INP1Q96A56 240 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 PRRX2Q99811 253 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TRIM2Q9C040 744 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 TMEM27Q9HBJ8 222 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 PCDHGA1Q9Y5H4 931 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 NINQ8N4C6 2090 aa15.8■□□□□ 0.12
HDDC3-206ENST00000561036 A0A087WUU8 490 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 SERINC4A6NH21 518 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 C9J4A7 227 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 AGRPO00253 132 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 EPHA2P29317 976 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 HLCSP50747 726 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CRISP1P54107 249 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 GABARAPL2P60520 117 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CSNK2BP67870 215 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 TARDBPQ13148 414 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CDK5R2Q13319 367 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 OR1Q1Q15612 314 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 NNATQ16517 81 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CTU2Q2VPK5 515 aaKnown RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 DCAF12Q5T6F0 453 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF517Q6ZMY9 492 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 SHISA6Q6ZSJ9 500 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 RRM2BQ7LG56 351 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 ZER1Q7Z7L7 766 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 RNF113BQ8IZP6 322 aaKnown RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 PIGXQ8TBF5 258 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CRB3Q9BUF7 120 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 PRR14Q9BWN1 585 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 FAM192AQ9GZU8 254 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 KRCC1Q9NPI7 259 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 CTPS2Q9NRF8 586 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 DNAJB12Q9NXW2 375 aaKnown RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 NDUFA13Q9P0J0 144 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 REV1Q9UBZ9 1251 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 PCDHGA6Q9Y5G7 932 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 COL27A1Q8IZC6 1860 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-206ENST00000561036 SEC16AO15027 2179 aa15.79■□□□□ 0.12
HDDC3-206ENST00000561036 ZAR1LA6NP61 321 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms