RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 HOXC12P31275 282 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 ASMTP46597 345 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 GUSBP1Q15486 140 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 SGCBQ16585 318 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 DUSP5Q16690 384 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNX1-213ENST00000561026 KRTAP21-3Q3LHN1 58 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 GALNTL6Q49A17 601 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 ARL13AQ5H913 290 aaPredicted RBP14.58□□□□□ -0.08
SNX1-213ENST00000561026 MFSD12Q6NUT3 480 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 ZCCHC12Q6PEW1 402 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 SZRD1Q7Z422 152 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 GGNQ86UU5 652 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 BANPQ8N9N5 519 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 WFDC11Q8NEX6 87 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 OR6Y1Q8NGX8 325 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 FBXO30Q8TB52 745 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 MTERF3Q96E29 417 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 POM121Q96HA1 1249 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 NEUROD4Q9HD90 331 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 BEX4Q9NWD9 120 aaPredicted RBP14.58□□□□□ -0.08
SNX1-213ENST00000561026 ZNF226Q9NYT6 803 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 C6orf203Q9P0P8 240 aaPredicted RBP14.58□□□□□ -0.08
SNX1-213ENST00000561026 STOML1Q9UBI4 398 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 VDAC3Q9Y277 283 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 A0A087WZY1 265 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 DEFB108AA8MXU0 73 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 TMEM233B4DJY2 109 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 C16orf97H3BN30 126 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 SIAH2O43255 324 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 NPHS1O60500 1241 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 FCGR2AP12318 317 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 POU2F1P14859 743 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 ZNF17P17021 662 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 LCN1P31025 176 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 FIGNL1Q6PIW4 674 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 FAM214BQ7L5A3 538 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 R3HCC1LQ7Z5L2 792 aaKnown RBP14.57□□□□□ -0.08
SNX1-213ENST00000561026 ZAR1Q86SH2 424 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 DDIASQ8IXT1 998 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 GTPBP8Q8N3Z3 284 aaPredicted RBP14.57□□□□□ -0.08
SNX1-213ENST00000561026 ZNF610Q8N9Z0 462 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 OR2W6PQ8NHA6 318 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 APOPT1Q96IL0 206 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 MED18Q9BUE0 208 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 L2HGDHQ9H9P8 463 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 EML4Q9HC35 981 aaKnown RBP14.57□□□□□ -0.08
SNX1-213ENST00000561026 UBQLN4Q9NRR5 601 aa14.57□□□□□ -0.08
SNX1-213ENST00000561026 NAV3Q8IVL0 2385 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 EIF1AYO14602 144 aaKnown RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 PIP5K1BO14986 540 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 ALOX5P09917 674 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 EFNA1P20827 205 aaPredicted RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 CCKARP32238 428 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 EIF1AXP47813 144 aaKnown RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 SLC6A8P48029 635 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 KCNJ5P48544 419 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 SERPINB4P48594 390 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 MLC1Q15049 377 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 EXOSC6Q5RKV6 272 aaKnown RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 LRIG3Q6UXM1 1119 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 TRABD2AQ86V40 505 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 CXorf67Q86X51 503 aaPredicted RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 WDR75Q8IWA0 830 aaKnown RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 GATSQ8NAP1 163 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 ACTRT2Q8TDY3 377 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 FAM120BQ96EK7 910 aaKnown RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 GSX1Q9H4S2 264 aaPredicted RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
SNX1-213ENST00000561026 FBXO34Q9NWN3 711 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 ATP6V1HQ9UI12 483 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 PROCRQ9UNN8 238 aa14.56□□□□□ -0.08
SNX1-213ENST00000561026 A0A1W2PRB8 838 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 C7orf72A4D263 438 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 TMEM114B3SHH9 223 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 ADAMDEC1O15204 470 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 HPGDP15428 266 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 DDX5P17844 614 aaKnown RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 CRYGSP22914 178 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 PSMA4P25789 261 aaKnown RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 PRIM2P49643 509 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 CTU2Q2VPK5 515 aaKnown RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 CCNJQ5T5M9 372 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 CPTPQ5TA50 214 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 MISPQ8IVT2 679 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 COX18Q8N8Q8 333 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 OR10D3Q8NH80 312 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 ZBTB8AQ96BR9 441 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 TRIM44Q96DX7 344 aaPredicted RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 OTUB1Q96FW1 271 aaPredicted RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 ADGRG7Q96K78 797 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 PPP3R2Q96LZ3 170 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 NPAS1Q99742 590 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 MECRQ9BV79 373 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 PRRG4Q9BZD6 226 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 PLSCR4Q9NRQ2 329 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 DUSP22Q9NRW4 184 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms