RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TPSB2P20231 275 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 MDKP21741 143 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 PSMA3P25788 255 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 RPA3P35244 121 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 ADRA1AP35348 466 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 COILP38432 576 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 KLK7P49862 253 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 PDLIM4P50479 330 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 HNRNPFP52597 415 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 POLR2FP61218 127 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 SIRPAP78324 504 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 ABATP80404 500 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 TBL3Q12788 808 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 SEMA3AQ14563 771 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 ITIH4Q14624 930 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 MFSD13AQ14CX5 517 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 HERC3Q15034 1050 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 TPSAB1Q15661 275 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CTU2Q2VPK5 515 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 IQCCQ4KMZ1 466 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 DEFB134Q4QY38 66 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 TIGD3Q6B0B8 471 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 OR2A2Q6IF42 318 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 TTC23LQ6PF05 361 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 ASPGQ86U10 573 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 GRAMD2AQ8IUY3 354 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CDKL3Q8IVW4 592 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 METTL25Q8N6Q8 603 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 SYT14Q8NB59 555 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CAMKVQ8NCB2 501 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 PPFIBP2Q8ND30 876 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 OR5L2Q8NGL0 311 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 OR9A1PQ8NGU1 263 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 GABPB2Q8TAK5 448 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 BCAS4Q8TDM0 211 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 SLC13A3Q8WWT9 602 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 FIG4Q92562 907 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 S100PBPQ96BU1 408 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 SPACA9Q96E40 222 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 SMIM10Q96HG1 83 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CDKN2AIPNLQ96HQ2 116 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 DNAJC1Q96KC8 554 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 C1orf147Q96MC9 270 aaPredicted RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 CCT8L2Q96SF2 557 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 HBEGFQ99075 208 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 SLC6A7Q99884 636 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CITED1Q99966 193 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 ZNF670Q9BS34 389 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 CARD6Q9BX69 1037 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 BPESC1Q9GZL8 116 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 FAM234AQ9H0X4 552 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 RNF122Q9H9V4 155 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 FN3KRPQ9HA64 309 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 FAIMQ9NVQ4 179 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 UTP6Q9NYH9 597 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 SPATA7Q9P0W8 599 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 KLHL21Q9UJP4 597 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 PROCRQ9UNN8 238 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 DLGAP4Q9Y2H0 992 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 R3HDM2Q9Y2K5 976 aaKnown RBP3.27□□□□□ -1.89
HERC1-211ENST00000560983 GPR52Q9Y2T5 361 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 HEATR5AQ86XA9 2040 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 ARHGAP21Q5T5U3 1957 aa3.27□□□□□ -1.89
HERC1-211ENST00000560983 SNRNP200O75643 2136 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 HECTD4Q9Y4D8 3996 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CTAGE15A4D2H0 777 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 OR51F1A6NGY5 319 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 SLC22A20A6NK97 555 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 M0QZ24 198 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RRHO14718 337 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 SNX4O95219 450 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ETHE1O95571 254 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PPP1R3DO95685 299 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ZNF708P17019 499 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PSMB1P20618 241 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 IL11P20809 199 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PRTN3P24158 256 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ADRA1DP25100 572 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 SLC7A1P30825 629 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 MTIF2P46199 727 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 RPL21P46778 160 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 PTDSS1P48651 473 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 SUMO3P55854 103 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 RPS15AP62244 130 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 SCGB2A2Q13296 93 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ARHGAP19Q14CB8 494 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 P2RY6Q15077 328 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 TOMM20Q15388 145 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ZNHIT3Q15649 155 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 TSC22D1Q15714 1073 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 TAB1Q15750 504 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 FAM189A2Q15884 450 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 NTRK2Q16620 822 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CAPN13Q6MZZ7 669 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 SCIMPQ6UWF3 145 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ENPP6Q6UWR7 440 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms