RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HTR1FP30939 366 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 FGF9P31371 208 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SOX3P41225 446 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CAPZA2P47755 286 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 RORCP51449 518 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PSMD4P55036 377 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CTBP2P56545 445 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 IGLV3-21P80748 117 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SHC2P98077 582 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 RUNX1T1Q06455 604 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 FOXD4Q12950 439 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 BIKQ13323 160 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 FZD2Q14332 565 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PRTGQ2VWP7 1150 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 TRMT12Q53H54 448 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 MRPL2Q5T653 305 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CD200R1LQ6Q8B3 271 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 QSOX2Q6ZRP7 698 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 DGLUCYQ7Z3D6 616 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 TAF8Q7Z7C8 310 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 HMGN2P46Q86SG4 172 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SLC22A16Q86VW1 577 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 NRMQ8IXM6 262 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF595Q8IYB9 648 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SLC22A18ASQ8N1D0 253 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ARHGEF39Q8N4T4 335 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PARP16Q8N5Y8 322 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF485Q8NCK3 441 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 OR2T33Q8NG76 320 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 OR52L1Q8NGH7 329 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 OR4Q3Q8NH05 313 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SETD6Q8TBK2 473 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CHAC2Q8WUX2 184 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 HMGB4Q8WW32 186 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 OIT3Q8WWZ8 545 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 UFD1Q92890 307 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ANKRD9Q96BM1 317 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF578Q96N58 590 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 NELL2Q99435 816 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CCDC3Q9BQI4 270 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PRSS27Q9BQR3 290 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SLC30A2Q9BRI3 323 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 ARHGAP9Q9BRR9 750 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 RNF167Q9H6Y7 350 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 WSB2Q9NYS7 404 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CNIH4Q9P003 139 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SLC7A7Q9UM01 511 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 BAIAP2Q9UQB8 552 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 MRPS33Q9Y291 106 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 PCDHGB6Q9Y5F9 930 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 TRDV1A0A1B0GX56 115 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 A0A1W2PPC4 97 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF860A6NHJ4 632 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SHISA7A6NL88 538 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 C2CD4DB7Z1M9 353 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TBX1O43435 398 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 NARSO43776 548 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CBX7O95931 251 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 EIF2S1P05198 315 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PVRP15151 417 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 DRD5P21918 477 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GABRA5P31644 462 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GALNSP34059 522 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 RBM34P42696 430 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SLC1A3P43003 542 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SLC9A3P48764 834 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 VSX2P58304 361 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 HHEXQ03014 270 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF155Q12901 538 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GPR50Q13585 617 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 DOC2BQ14184 412 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 OR1Q1Q15612 314 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ZNHIT3Q15649 155 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GPR68Q15743 365 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CCDC85BQ15834 202 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 AMZ1Q400G9 498 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SOWAHCQ53LP3 525 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GARNL3Q5VVW2 1013 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 LIPKQ5VXJ0 399 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 STEAP3Q658P3 488 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 HSDL2Q6YN16 418 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PRSS41Q7RTY9 318 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 BCDIN3DQ7Z5W3 292 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PARGQ86W56 976 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 OR4N5Q8IXE1 308 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CMIPQ8IY22 773 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CDK20Q8IZL9 346 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 LNX2Q8N448 690 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 KLHL36Q8N4N3 616 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 FAM181AQ8N9Y4 354 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM52Q8NDY8 209 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 OR6C4Q8NGE1 309 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms