RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SMPDL3BQ92485 455 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 TMBIM1Q969X1 311 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 MTBPQ96DY7 904 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 COX4I2Q96KJ9 171 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 DMRTB1Q96MA1 342 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 VSTM2LQ96N03 204 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ZFP3Q96NJ6 502 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 WFIKKN1Q96NZ8 548 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 COL21A1Q96P44 957 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 TM9SF2Q99805 663 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 PIGQQ9BRB3 760 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 TACO1Q9BSH4 297 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 VPS11Q9H270 941 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 KCNK9Q9NPC2 374 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 BEX4Q9NWD9 120 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 TAS2R10Q9NYW0 307 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 FLRT3Q9NZU0 649 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 C6orf203Q9P0P8 240 aaPredicted RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 KLHL14Q9P2G3 628 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 BCAP29Q9UHQ4 241 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 SLC12A4Q9UP95 1085 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 ARL2BPQ9Y2Y0 163 aa5.23□□□□□ -1.57
USP3-215ENST00000559771 MRPS18CQ9Y3D5 142 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 TNPO3Q9Y5L0 923 aaKnown RBP5.23□□□□□ -1.57
USP3-215ENST00000559771 A6NHS1 94 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 SMIM23A6NLE4 172 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 A8MT66 165 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 H0Y3Z8 333 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 MANBAO00462 879 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 AKAP8O43823 692 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 ERN1O75460 977 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 OR4F21O95013 312 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 HEXAP06865 529 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 THBDP07204 575 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 KRT15P19012 456 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 TCEA1P23193 301 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 CHMP24386 653 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 GRK2P25098 689 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 GCAP28676 217 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 MC3RP41968 323 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PCYT1AP49585 367 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 HTR6P50406 440 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 SERPINB8P50452 374 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 RASSF2P50749 326 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 TRA2BP62995 288 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 RPP38P78345 283 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 PSG6Q00889 435 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 RIPK1Q13546 671 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 RCAN2Q14206 197 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 CAPRIN1Q14444 709 aaKnown RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 UNC50Q53HI1 259 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 Q5PR19 223 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 C10orf62Q5T681 223 aaPredicted RBP5.22□□□□□ -1.57
USP3-215ENST00000559771 CLEC9AQ6UXN8 241 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PAGE2Q7Z2X7 111 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 SPATA21Q7Z572 469 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 MILR1Q7Z6M3 343 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 IFNEQ86WN2 208 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 LRRC34Q8IZ02 419 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 FADS6Q8N9I5 356 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 OR2M3Q8NG83 312 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 OR7G2Q8NG99 324 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 OR9A2Q8NGT5 310 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 OR14L1PQ8NHC6 308 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.22□□□□□ -1.57
USP3-215ENST00000559771 DCAKDQ8WVC6 231 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 FIG4Q92562 907 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 KAT2AQ92830 837 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 ATP6V1E2Q96A05 226 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 ZBTB9Q96C00 473 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 KLHL29Q96CT2 875 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 LRRC46Q96FV0 321 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 APIPQ96GX9 242 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 ADOQ96SZ5 270 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PIP5K1AQ99755 562 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 YIPF4Q9BSR8 244 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PIGMQ9H3S5 423 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 ZCCHC4Q9H5U6 513 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 BRF2Q9HAW0 419 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 FOLH1BQ9HBA9 442 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 KLHL28Q9NXS3 571 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 AHSPQ9NZD4 102 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 KLRF1Q9NZS2 232 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 PACSIN3Q9UKS6 424 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 EDARQ9UNE0 448 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 DLGAP4Q9Y2H0 992 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 CAPN7Q9Y6W3 813 aa5.22□□□□□ -1.57
USP3-215ENST00000559771 TRIM64A6NGJ6 449 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TRIM64BA6NI03 449 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 H7C1Q1 480 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 KLF11O14901 512 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TYROBPO43914 113 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 FADS1O60427 444 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 DLX3O60479 287 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 PLOD3O60568 738 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 REM1O75628 298 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 DCTN3O75935 186 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 TGDSO95455 350 aa5.21□□□□□ -1.58
USP3-215ENST00000559771 PSMG1O95456 288 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms