RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RUNDC3AQ59EK9 446 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 TYW3Q6IPR3 259 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 SNX32Q86XE0 403 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 SPPL2CQ8IUH8 684 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 ZG16BQ96DA0 208 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 CCDC106Q9BWC9 280 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 SLC6A15Q9H2J7 730 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 IKZF5Q9H5V7 419 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 LDAHQ9H6V9 325 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 ADAM21Q9UKJ8 722 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 LIPT1Q9Y234 373 aa18.47■□□□□ 0.55
TSPAN3-207ENST00000559494 TENM4Q6N022 2769 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 IGLV3-32A0A0A0MS00 114 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 TRGV5A0A0B4J1U4 118 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 CENPVL1A0A0U1RR11 272 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 SUSD5O60279 629 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 H6PDO95479 791 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 CHRM4P08173 479 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 NUDT7P0C024 238 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 RNF144AP50876 292 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 DSTNP60981 165 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 KCNC4Q03721 635 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 CHRNEQ04844 493 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 TOMM20Q15388 145 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 CD226Q15762 336 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 ZNF141Q15928 474 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 EIPR1Q53HC9 387 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 ARHGAP11AQ6P4F7 1023 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 FRRS1Q6ZNA5 592 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 DHDDSQ86SQ9 333 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 YRDCQ86U90 279 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 C10orf111Q8N326 155 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 FAM83FQ8NEG4 500 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 TRNT1Q96Q11 434 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 CPPED1Q9BRF8 314 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 MYLK2Q9H1R3 596 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 SLC38A1Q9H2H9 487 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 RAD21L1Q9H4I0 556 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 POLE3Q9NRF9 147 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 WDR45Q9Y484 360 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 DTNAQ9Y4J8 743 aa18.46■□□□□ 0.55
TSPAN3-207ENST00000559494 PCNX1Q96RV3 2341 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 KIAA0513O60268 411 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 ZIC3O60481 467 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 HCN1O60741 890 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 SLC19A2O60779 497 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 UGT2B17O75795 530 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 STSP08842 583 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 TFPTP0C1Z6 253 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 NR2F1P10589 423 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 BMP2P12643 396 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 GPX2P18283 190 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 ENDOUP21128 410 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 PTGS2P35354 604 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 RBPJQ06330 500 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 NFYCQ13952 458 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 MAPRE2Q15555 327 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 MAPK14Q16539 360 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 WIPI1Q5MNZ9 446 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 Q6ZPB1 254 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 LRRC74BQ6ZQY2 392 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 TREML1Q86YW5 311 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 OR4K17Q8NGC6 315 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 NEIL3Q8TAT5 605 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 ANKRD27Q96NW4 1050 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 CCT8L2Q96SF2 557 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 CGREF1Q99674 301 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 OR2B2Q9GZK3 357 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 RUBCNLQ9H714 662 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 SPRR3Q9UBC9 169 aa18.45■□□□□ 0.54
TSPAN3-207ENST00000559494 HEATR5AQ86XA9 2040 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 AQP7O14520 342 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 OIP5O43482 229 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 TNFRSF21O75509 655 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 PPIBP23284 216 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 SRD5A2P31213 254 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 SRSF1Q07955 248 aaKnown RBP eCLIP18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 FADDQ13158 208 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 CYLC2Q14093 348 aaPredicted RBP18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 COQ5Q5HYK3 327 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 PDZK1Q5T2W1 519 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 REP15Q6BDI9 236 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 ZNF619Q8N2I2 560 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 POU5F2Q8N7G0 328 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 ZNF527Q8NB42 609 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 PHOSPHO1Q8TCT1 267 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 SLC38A5Q8WUX1 472 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 KLHDC3Q9BQ90 382 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 TRIM8Q9BZR9 551 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 EXO5Q9H790 373 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 P2RX2Q9UBL9 471 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 TNFRSF10DQ9UBN6 386 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 SLC6A5Q9Y345 797 aa18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 MRPS18CQ9Y3D5 142 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-207ENST00000559494 EVPLLA8MZ36 301 aa18.43■□□□□ 0.54
TSPAN3-207ENST00000559494 NPIPA2E9PIF3 369 aa18.43■□□□□ 0.54
TSPAN3-207ENST00000559494 NPIPA3F8WFD2 350 aa18.43■□□□□ 0.54
TSPAN3-207ENST00000559494 GMFGO60234 142 aa18.43■□□□□ 0.54
TSPAN3-207ENST00000559494 SHOX2O60902 331 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms