RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 SPAG7O75391 227 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 KCNK2O95069 426 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 NKX2-2O95096 273 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 CRHP06850 196 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 HOXC12P31275 282 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 UGT2B10P36537 528 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 EEFSECP57772 596 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 EEF1A1P68104 462 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 NKX6-1P78426 367 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 EEF1A1P5Q5VTE0 462 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 KANK2Q63ZY3 851 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 ZCCHC23Q6ZST2 131 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 TDRPQ86YL5 185 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 OR7A2PQ8NGA2 310 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 CHMP6Q96FZ7 201 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 FCRL1Q96LA6 429 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 HS3ST6Q96QI5 342 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 CCT7Q99832 543 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 PRRG4Q9BZD6 226 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 SLC17A7Q9P2U7 560 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 NPIPA5A0A0B4J1W7 369 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 NPIPA7E9PJI5 369 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 PIP5K1BO14986 540 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 TRIM13O60858 407 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 NPIPA8P0DM63 369 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 BCKDHAP12694 445 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 RPS3AP61247 264 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 TMEM44Q2T9K0 475 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 CDRT4Q8N9R6 151 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 CEP70Q8NHQ1 597 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 ZFP28Q8NHY6 868 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 TWIST2Q8WVJ9 160 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 ZBED6CLQ96FA7 236 aaPredicted RBP18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 PROCRQ9UNN8 238 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 AP4B1Q9Y6B7 739 aa18.4■□□□□ 0.54
TSPAN3-206ENST00000559373 IGLV3-32A0A0A0MS00 114 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 TNFSF11O14788 317 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 EMC8O43402 210 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 IL11P20809 199 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 UGT3A2Q3SY77 523 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 ARL13AQ5H913 290 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 MFSD12Q6NUT3 480 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 CXorf67Q86X51 503 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 METTL25Q8N6Q8 603 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 OR10D3Q8NH80 312 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 HOXB13Q92826 284 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 CDS1Q92903 461 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 METTL2AQ96IZ6 378 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 RNF145Q96MT1 663 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 MS4A4EQ96PG1 132 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 SLC39A3Q9BRY0 314 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 C1orf50Q9BV19 199 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 SIRT3Q9NTG7 399 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 GIN1Q9NXP7 522 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF175Q9Y473 711 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 TRAF6Q9Y4K3 522 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 SNX8Q9Y5X2 465 aa18.39■□□□□ 0.53
TSPAN3-206ENST00000559373 USF3Q68DE3 2245 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 ALG1L2C9J202 215 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 C16orf97H3BN30 126 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 CXCL13O43927 109 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 PEX11AO75192 247 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 CHEK2O96017 543 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 ALOX5P09917 674 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 TBXA2RP21731 343 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 FRKP42685 505 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 PDE7AQ13946 482 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 LASP1Q14847 261 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 GUSBP1Q15486 140 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 CD226Q15762 336 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 GLYR1Q49A26 553 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 VPS26BQ4G0F5 336 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 COX18Q8N8Q8 333 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 FAM110BQ8TC76 370 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 FAM120BQ96EK7 910 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 APOPT1Q96IL0 206 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 C3orf30Q96M34 536 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 IQCGQ9H095 443 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 ZNF226Q9NYT6 803 aa18.38■□□□□ 0.53
TSPAN3-206ENST00000559373 ZANQ9Y493 2812 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 A0A0J9YW62 118 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 A0A1W2PRB8 838 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 LINC01387J3KSC0 135 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 OIP5O43482 229 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 GOSR1O95249 250 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 SLU7O95391 586 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 NTN1O95631 604 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 PLGP00747 810 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 HMGN2P05204 90 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 LAMP1P11279 417 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 NEFHP12036 1026 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 HPGDP15428 266 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 CRYGSP22914 178 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 SHC1P29353 583 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 ARRB2P32121 409 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 CTU2Q2VPK5 515 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 PLPPR5Q32ZL2 321 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 FAM214BQ7L5A3 538 aa18.37■□□□□ 0.53
TSPAN3-206ENST00000559373 BANPQ8N9N5 519 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms