RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TRAF4Q9BUZ4 470 aaPredicted RBP5.44□□□□□ -1.54
USP3-212ENST00000559276 SARGQ9BW04 601 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 SGPP1Q9BX95 441 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 GABARAPL3Q9BY60 117 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 RBCK1Q9BYM8 510 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 AICDAQ9GZX7 198 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 HOXD1Q9GZZ0 328 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 SPNS1Q9H2V7 528 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 TPK1Q9H3S4 243 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 MMP25Q9NPA2 562 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 IL1RAPQ9NPH3 570 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 ACOT13Q9NPJ3 140 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 SEMA4BQ9NPR2 832 aaPredicted RBP5.44□□□□□ -1.54
USP3-212ENST00000559276 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
USP3-212ENST00000559276 DIABLOQ9NR28 239 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 KLHL1Q9NR64 748 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 TMEM184CQ9NVA4 438 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 C1orf109Q9NX04 203 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.44□□□□□ -1.54
USP3-212ENST00000559276 TRPS1Q9UHF7 1281 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 IKZF3Q9UKT9 509 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 CFL2Q9Y281 166 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 TRAPPC4Q9Y296 219 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 MEMO1Q9Y316 297 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 ASB1Q9Y576 335 aa5.44□□□□□ -1.54
USP3-212ENST00000559276 HCFC1P51610 2035 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 F8P00451 2351 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 CACNA1CQ13936 2221 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PKDREJQ9NTG1 2253 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 IGKV3D-11A0A0A0MRZ8 115 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 SERTM1A2A2V5 107 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PABPN1LA6NDY0 278 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 ZNF860A6NHJ4 632 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 GABRR3A8MPY1 467 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 FAM25AB3EWG3 89 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 FAM25CB3EWG5 89 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 FAM25GB3EWG6 89 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 E5RI56 91 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 NPIPA5E9PKD4 350 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 EIF3FO00303 357 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 GALR3O60755 368 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 SEC22BO75396 215 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 CDC123O75794 336 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 KRT75O95678 551 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 KRT8P05787 483 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PGRP06401 933 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 G6PDP11413 515 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PPIBP23284 216 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 PSMB9P28065 219 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 SOX6P35712 828 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 RPS5P46782 204 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 AVPR1BP47901 424 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 TRPC1P48995 793 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 ALDH9A1P49189 494 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 CLK1P49759 484 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 RGS4P49798 205 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 TPTEP56180 551 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 C21orf58P58505 322 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 MTPNP58546 118 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 SLC26A5P58743 744 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 RPS15AP62244 130 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 BTG2P78543 158 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 IFITM3Q01628 133 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 MEF2AQ02078 507 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 LRRC74AQ0VAA2 488 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 HYAL2Q12891 473 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 GTF2H2Q13888 395 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 VEZF1Q14119 521 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 MAD2L1BPQ15013 274 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 ABRAXAS2Q15018 415 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 NDUFA9Q16795 377 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 TUSC1Q2TAM9 212 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.43□□□□□ -1.54
USP3-212ENST00000559276 AP5B1Q2VPB7 878 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 MINDY4Q4G0A6 757 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 AGAP6Q5VW22 663 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 GTF2H2CQ6P1K8 395 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 FAHD1Q6P587 224 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PAPD4Q6PIY7 484 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 XKRXQ6PP77 449 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 AGTRAPQ6RW13 159 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 LCTLQ6UWM7 567 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 RPTNQ6XPR3 784 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 C3P1Q6ZMU1 363 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 GDF7Q7Z4P5 450 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 GALNTL5Q7Z4T8 443 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 ASPGQ86U10 573 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 KRT73Q86Y46 540 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 DOLPP1Q86YN1 238 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 ZDHHC21Q8IVQ6 265 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 DEPDC4Q8N2C3 294 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 ARMC10Q8N2F6 343 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 C1orf52Q8N6N3 182 aaKnown RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 MFSD9Q8NBP5 474 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 ZNF740Q8NDX6 193 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 SIMC1Q8NDZ2 872 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 NFAM1Q8NET5 270 aaPredicted RBP5.43□□□□□ -1.54
USP3-212ENST00000559276 LILRB4Q8NHJ6 448 aa5.43□□□□□ -1.54
USP3-212ENST00000559276 NDNFQ8TB73 568 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms