RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NPRL2Q8WTW4 380 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MOCOSQ96EN8 888 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 C7orf34Q96L11 122 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF597Q96LX8 424 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 C12orf66Q96MD2 445 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 NSMCE3Q96MG7 304 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 PGLYRP2Q96PD5 576 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 COPS8Q99627 209 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 FEM1AQ9BSK4 669 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CHCHD5Q9BSY4 110 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ST6GALNAC5Q9BVH7 336 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SPATA16Q9BXB7 569 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 BARHL1Q9BZE3 327 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 OCR1Q9BZK8 76 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ROPN1BQ9BZX4 212 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 YY1AP1Q9H869 796 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 JPT2Q9H910 190 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TIGARQ9NQ88 270 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 NANSQ9NR45 359 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ELOVL2Q9NXB9 296 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 WWOXQ9NZC7 414 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 PIPOXQ9P0Z9 390 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 RCOR3Q9P2K3 495 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 PCSK1NQ9UHG2 260 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CYTH4Q9UIA0 394 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MUTYHQ9UIF7 546 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 PIGLQ9Y2B2 252 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CAB39Q9Y376 341 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TMED5Q9Y3A6 229 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 OARD1Q9Y530 152 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 GMPPBQ9Y5P6 360 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SCN5AQ14524 2016 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ESYT2A0FGR8 921 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 BCLAF3A2AJT9 711 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 LRP5LA4QPB2 252 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NPIPA7E9PJI5 369 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 H0YC42 278 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 BTN3A3O00478 584 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NR5A2O00482 541 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NTN3O00634 580 aaPredicted RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR7A17O14581 309 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 LSM1O15116 133 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TM9SF1O15321 606 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 MSH4O15457 936 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RGS16O15492 202 aaPredicted RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 B3GAT3O94766 335 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CA1P00915 261 aaPredicted RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SERPINB2P05120 415 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 H2BFMP0C1H6 154 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NPIPA8P0DM63 369 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TROVE2P10155 538 aaKnown RBP eCLIP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SLC2A3P11169 496 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RNH1P13489 461 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 POU2F1P14859 743 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PGCP20142 388 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TBXA2RP21731 343 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PTBP1P26599 531 aaKnown RBP eCLIP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RPL4P36578 427 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 EPS15P42566 896 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ATP5OP48047 213 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 POU3F4P49335 361 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 FNTAP49354 379 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CCT3P49368 545 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ATP4BP51164 291 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SUCLG1P53597 346 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SEC61GP60059 68 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RPL23AP62750 156 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ACY1Q03154 408 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF33BQ06732 778 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PUDPQ08623 228 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CALCOCO2Q13137 446 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PLD1Q13393 1074 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 IL18R1Q13478 541 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ELAVL3Q14576 367 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ABRAXAS2Q15018 415 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 WDR43Q15061 677 aaKnown RBP eCLIP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CFAP221Q4G0U5 840 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TEX44Q53QW1 395 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PDZK1Q5T2W1 519 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PRAMEF5Q5TYX0 476 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PRAMEF6Q5VXH4 476 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TPGS2Q68CL5 300 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR4F3Q6IEY1 312 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 EMBQ6PCB8 327 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 VITQ6UXI7 678 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 KDM7AQ6ZMT4 941 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NLRP9Q7RTR0 991 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CARM1Q86X55 608 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 LRRC75A-AS1Q8N1F1 130 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 BPIFB2Q8N4F0 458 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 Q8NBF4 154 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SUMF1Q8NBK3 374 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR10A7Q8NGE5 316 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR51G2Q8NGK0 314 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR4Q3Q8NH05 313 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 AENQ8WTP8 325 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TRUB1Q8WWH5 349 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 FAM3CQ92520 227 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PIGCQ92535 297 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RASD2Q96D21 266 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms