RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 Q6ZPB1 254 aaPredicted RBP10.4□□□□□ -0.74
SNX1-204ENST00000559061 DHDDSQ86SQ9 333 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 MTDHQ86UE4 582 aaKnown RBP10.4□□□□□ -0.74
SNX1-204ENST00000559061 SLC22A16Q86VW1 577 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 PLCZ1Q86YW0 608 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 TRIML2Q8N7C3 387 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 FAM83FQ8NEG4 500 aaPredicted RBP10.4□□□□□ -0.74
SNX1-204ENST00000559061 SLC38A5Q8WUX1 472 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 XAGE5Q8WWM1 108 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 MAL2Q969L2 176 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 OR2B2Q9GZK3 357 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 MED11Q9P086 117 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 LEF1Q9UJU2 399 aaPredicted RBP10.4□□□□□ -0.74
SNX1-204ENST00000559061 MKLN1Q9UL63 735 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 NDUFAF1Q9Y375 327 aa10.4□□□□□ -0.74
SNX1-204ENST00000559061 NCOA6Q14686 2063 aaPredicted RBP10.4□□□□□ -0.75
SNX1-204ENST00000559061 DUXAA6NLW8 204 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 KDM4EB2RXH2 506 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 KRT75O95678 551 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 STSP08842 583 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 GPX2P18283 190 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 GDF1P27539 372 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ADSLP30566 484 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 LCN1P31025 176 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ATP12AP54707 1039 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 MTPNP58546 118 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 RPP38P78345 283 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 ZNF117Q03924 483 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 CRYZQ08257 329 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 C3AR1Q16581 482 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 TMEM44Q2T9K0 475 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 FLYWCH1Q4VC44 716 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 KRTCAP3Q53RY4 240 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 WIPI1Q5MNZ9 446 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 PDZK1Q5T2W1 519 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 C8orf82Q6P1X6 216 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 ARSKQ6UWY0 536 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 NCCRP1Q6ZVX7 275 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 YRDCQ86U90 279 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 COMTD1Q86VU5 262 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 PTOV1Q86YD1 416 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 RPRMLQ8N4K4 120 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 FAM71CQ8NEG0 241 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 OR1J4Q8NGS1 313 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 DUSP19Q8WTR2 217 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ANKRD27Q96NW4 1050 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 CGREF1Q99674 301 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 G6PC3Q9BUM1 346 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 DSN1Q9H410 356 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ACKR4Q9NPB9 350 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 UBQLN4Q9NRR5 601 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 QPCTLQ9NXS2 382 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 TINAGQ9UJW2 476 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 ADAM21Q9UKJ8 722 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 SLC6A5Q9Y345 797 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 L3MBTL1Q9Y468 752 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 CAPN7Q9Y6W3 813 aa10.39□□□□□ -0.75
SNX1-204ENST00000559061 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
SNX1-204ENST00000559061 LOC100653049A0A140TA62 436 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 ACOT7O00154 380 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 AQP7O14520 342 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 SLC22A2O15244 555 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 CDC40O60508 579 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■■■ 31.7
SNX1-204ENST00000559061 SLC19A2O60779 497 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 DNAJA2O60884 412 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 STX11O75558 287 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 KRT34O76011 436 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 ANP32DO95626 131 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 AK1P00568 194 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 PSMA4P25789 261 aaKnown RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 PGM1P36871 562 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 CRATP43155 626 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 MAGEA8P43361 318 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 MASP1P48740 699 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 CRYBA2P53672 197 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 PSMD4P55036 377 aaKnown RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 GFRA1P56159 465 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 DSTNP60981 165 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 SKP2Q13309 424 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 GPR68Q15743 365 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 TRMT5Q32P41 509 aaKnown RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 COQ5Q5HYK3 327 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 C16orf62Q7Z3J2 963 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 NET1Q7Z628 596 aaPredicted RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 GHDCQ8N2G8 530 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 ZNF619Q8N2I2 560 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 MARVELD2Q8N4S9 558 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 NEIL3Q8TAT5 605 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 POC1BQ8TC44 478 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 RCN3Q96D15 328 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 C1GALT1C1Q96EU7 318 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms