RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TIGD3Q6B0B8 471 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 LARP4Q71RC2 724 aaKnown RBP eCLIP6.66□□□□□ -1.34
SPG11-213ENST00000558988 LACC1Q8IV20 430 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 SLC44A2Q8IWA5 706 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 IFT20Q8IY31 132 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 PM20D2Q8IYS1 436 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 GCNT2Q8N0V5 402 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 RELL2Q8NC24 303 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 FAM83FQ8NEG4 500 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 KIF18AQ8NI77 898 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 UBLCP1Q8WVY7 318 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 ABTB1Q969K4 478 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 EFHD2Q96C19 240 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 LRRC46Q96FV0 321 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 APIPQ96GX9 242 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 BBS4Q96RK4 519 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 UGT2B28Q9BY64 529 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 FUT8Q9BYC5 575 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 LIME1Q9H400 295 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 BRF2Q9HAW0 419 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 AURKAIP1Q9NWT8 199 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 PRODH2Q9UF12 536 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 DKKL1Q9UK85 242 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 CES1P1Q9UKY3 287 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 CFL2Q9Y281 166 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 RPH3AQ9Y2J0 694 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 FIS1Q9Y3D6 152 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 L3MBTL1Q9Y468 752 aa6.66□□□□□ -1.34
SPG11-213ENST00000558988 POLR3HQ9Y535 204 aaPredicted RBP6.66□□□□□ -1.34
SPG11-213ENST00000558988 TEP1Q99973 2627 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 A0A1W2PPM1 405 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 FRG2CA6NGY1 282 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 AHRRA9YTQ3 701 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CDC14BO60729 498 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 ERN1O75460 977 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 EPPINO95925 133 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 ANXA4P09525 319 aaPredicted RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 MYL2P10916 166 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 PTPN6P29350 595 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 TIA1P31483 386 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPG11-213ENST00000558988 CPOXP36551 454 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CPA2P48052 419 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 EMDP50402 254 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 NCBP2P52298 156 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPG11-213ENST00000558988 ZNF136P52737 540 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 FOXA1P55317 472 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 RAE1P78406 368 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 C2orf80Q0P641 193 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 MGAT2Q10469 447 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 MAP4K2Q12851 820 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 LCP2Q13094 533 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SLC29A2Q14542 456 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CEBPEQ15744 281 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SPIN4Q56A73 249 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CFAP157Q5JU67 520 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 VASNQ6EMK4 673 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 PPP4R4Q6NUP7 873 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 TRMT10CQ7L0Y3 403 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 NUP54Q7Z3B4 507 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SZRD1Q7Z422 152 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 LUZP2Q86TE4 346 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 JAZF1Q86VZ6 243 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SLC22A9Q8IVM8 553 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 UBQLNLQ8IYU4 475 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 FAM9CQ8IZT9 166 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CEP112Q8N8E3 955 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 ACBD4Q8NC06 268 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 OR4K17Q8NGC6 315 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 OR4N2Q8NGD1 307 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 GOT1L1Q8NHS2 421 aaPredicted RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 C16orf78Q8WTQ4 265 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 HGDQ93099 445 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 INTS12Q96CB8 462 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 TMCO6Q96DC7 493 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 MTBPQ96DY7 904 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 TMEM41AQ96HV5 264 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SFXN2Q96NB2 322 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 COL21A1Q96P44 957 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 ZNF382Q96SR6 550 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 SECISBP2Q96T21 854 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 TREX2Q9BQ50 279 aaPredicted RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 UBQLN3Q9H347 655 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 C12orf65Q9H3J6 166 aaKnown RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 EQTNQ9NQ60 294 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 MIEF1Q9NQG6 463 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 CCM2LQ9NUG4 571 aaPredicted RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 TAS2R10Q9NYW0 307 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 PSMC3IPQ9P2W1 217 aaPredicted RBP6.65□□□□□ -1.34
SPG11-213ENST00000558988 MCM8Q9UJA3 840 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 FBXL2Q9UKC9 423 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 PLEKHA6Q9Y2H5 1048 aa6.65□□□□□ -1.34
SPG11-213ENST00000558988 MED13LQ71F56 2210 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 AKAP6Q13023 2319 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 CCDC151A5D8V7 595 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 TUBAL3A6NHL2 446 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 ACOX3O15254 700 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 CTAG2O75638 210 aa6.64□□□□□ -1.35
SPG11-213ENST00000558988 HPNP05981 417 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms