RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 CFL2Q9Y281 166 aa6.34□□□□□ -1.39
MARK3-215ENST00000558787 RPH3AQ9Y2J0 694 aaPredicted RBP6.34□□□□□ -1.39
MARK3-215ENST00000558787 EXPH5Q8NEV8 1989 aa6.34□□□□□ -1.39
MARK3-215ENST00000558787 FAM221AA4D161 298 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 MBD3L4A6NDZ8 208 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 MBD3L3A6NE82 208 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 FRG2CA6NGY1 282 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 OR6C70A6NIJ9 312 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 MBD3L5A6NJ08 208 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 CD8B2A6NJW9 211 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 CLCA1A8K7I4 914 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 G3V2L1 256 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 H0Y3Z8 333 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 H0YC42 278 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TO15178 435 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 SCO2O43819 266 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ZIC3O60481 467 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TSPAN2O60636 221 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TRIM13O60858 407 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ERN1O75460 977 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 CBR3O75828 277 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 SNUPNO95149 360 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 TGM6O95932 706 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ACTL6AO96019 429 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 JUNP05412 331 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 BPGMP07738 259 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TMIGD3P0DMS9 266 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 NEFHP12036 1026 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 CPN1P15169 458 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 CD1EP15812 388 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 GRK2P25098 689 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TIA1P31483 386 aaKnown RBP eCLIP6.33□□□□□ -1.4
MARK3-215ENST00000558787 SERPINB5P36952 375 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 GAS1P54826 345 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TPD52P55327 224 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 GFRA1P56159 465 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 DNAJB13P59910 316 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 DCAF7P61962 342 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TRA2BP62995 288 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 ACSM2AQ08AH3 577 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 CSTF3Q12996 717 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 LCP2Q13094 533 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 MPP2Q14168 576 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 RCAN2Q14206 197 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 FBXL19-AS1Q494R0 122 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 FLYWCH1Q4VC44 716 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 LIPMQ5VYY2 423 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ACSM2BQ68CK6 577 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 LARP4Q71RC2 724 aaKnown RBP eCLIP6.33□□□□□ -1.4
MARK3-215ENST00000558787 PLCZ1Q86YW0 608 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 GCNT2Q8N0V5 402 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 GBP7Q8N8V2 638 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 OR5M1Q8NGP8 315 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 GOT1L1Q8NHS2 421 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 MBD3L2Q8NHZ7 208 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 ZPLD1Q8TCW7 415 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ZNF675Q8TD23 568 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 MGARPQ8TDB4 240 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 FAM222BQ8WU58 562 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 INTS12Q96CB8 462 aaKnown RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 L3HYPDHQ96EM0 354 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 C11orf24Q96F05 449 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 DOCK7Q96N67 2140 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 BTBD9Q96Q07 612 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 BBS4Q96RK4 519 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 RTN4RQ9BZR6 473 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 OR2B2Q9GZK3 357 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 DSN1Q9H410 356 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 CALHM2Q9HA72 323 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 MID1IP1Q9NPA3 183 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 GPATCH2Q9NW75 528 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 POLR3HQ9Y535 204 aaPredicted RBP6.33□□□□□ -1.4
MARK3-215ENST00000558787 PTGDR2Q9Y5Y4 395 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 NAV3Q8IVL0 2385 aa6.33□□□□□ -1.4
MARK3-215ENST00000558787 TUBAL3A6NHL2 446 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 MYO1GB0I1T2 1018 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 PLOD2O00469 737 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 GMFGO60234 142 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 PLOD3O60568 738 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 ENO1P06733 434 aaKnown RBP6.32□□□□□ -1.4
MARK3-215ENST00000558787 HSD3B1P14060 373 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 CD99P14209 185 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 HSD3B2P26439 372 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 DPP4P27487 766 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 IL12BP29460 328 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 ALDH3A1P30838 453 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 SRD5A2P31213 254 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 OPRM1P35372 400 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 MDH1P40925 334 aaKnown RBP6.32□□□□□ -1.4
MARK3-215ENST00000558787 MC3RP41968 323 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 RFX3P48380 749 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 LHX2P50458 406 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 NCBP2P52298 156 aaKnown RBP eCLIP6.32□□□□□ -1.4
MARK3-215ENST00000558787 PKNOX1P55347 436 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 CLDN15P56746 228 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 CLDN18P56856 261 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 B3GALT5-AS1P59052 145 aa6.32□□□□□ -1.4
MARK3-215ENST00000558787 ZNF155Q12901 538 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms