RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PABPN1LA6NDY0 278 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 C17orf51A8MQB3 221 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 STX16-NPEPL1H3BU86 382 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CLIC1O00299 241 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 STX16O14662 325 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 PRPF4O43172 522 aaKnown RBP eCLIP3.9□□□□□ -1.79
SPG11-211ENST00000558561 DPM1O60762 260 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SMIM24O75264 130 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 LYPLA1O75608 230 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 NEURL1O76050 574 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 MYO1DO94832 1006 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 AIFM1O95831 613 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 MBPP02686 304 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 IFNA16P05015 189 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CHRNGP07510 517 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 FAM58BPP0C7Q3 252 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SFTPCP11686 197 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 RNH1P13489 461 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 TNNI3P19429 210 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 EFNA1P20827 205 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 S1PR1P21453 382 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 HIST1H1TP22492 207 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 CPN2P22792 545 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ATP5F1P24539 256 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 TNFRSF8P28908 595 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ALDH3A1P30838 453 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 FEN1P39748 380 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 ARL1P40616 181 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 GSTM5P46439 218 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TNFSF10P50591 281 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 DGKQP52824 942 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 MTTPP55157 894 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 MLF1P58340 268 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TXNL4AP83876 142 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 FOLH1Q04609 750 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 PCLAFQ15004 111 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 LTB4RQ15722 352 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 HIST2H2ACQ16777 129 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 AP5B1Q2VPB7 878 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 UGT3A2Q3SY77 523 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TRMT12Q53H54 448 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 VWA5B1Q5TIE3 1220 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 FRG2Q64ET8 278 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ZNF324BQ6AW86 544 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 HIST2H2AA3Q6FI13 130 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CCDC144NLQ6NUI1 221 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TMEM65Q6PI78 240 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CLEC18BQ6UXF7 455 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 IL20RBQ6UXL0 311 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ZNF782Q6ZMW2 699 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 Q6ZSR9 355 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ABHD13Q7L211 337 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 GALNTL5Q7Z4T8 443 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TRABD2AQ86V40 505 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 GPR180Q86V85 440 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 EXOC3L1Q86VI1 746 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CHERPQ8IWX8 916 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 METTL4Q8N3J2 472 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ZADH2Q8N4Q0 377 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CPSF7Q8N684 471 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 C1orf52Q8N6N3 182 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 BANPQ8N9N5 519 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ATG16L2Q8NAA4 619 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CLEC1AQ8NC01 280 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CLEC18CQ8NCF0 446 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SEMA6DQ8NFY4 1073 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 M1APQ8TC57 530 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 METTL6Q8TCB7 284 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TCP10LQ8TDR4 215 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ADAMTS18Q8TE60 1221 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SELENOMQ8WWX9 145 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 METTL21AQ8WXB1 218 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 PNPLA2Q96AD5 504 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CMTM7Q96FZ5 175 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SENP5Q96HI0 755 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 FAR2Q96K12 515 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 PKNOX2Q96KN3 472 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 HS6ST2Q96MM7 605 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ZIM3Q96PE6 472 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 FAM111AQ96PZ2 611 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 FRG2BQ96QU4 278 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 SERINC2Q96SA4 455 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 BARD1Q99728 777 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 TBCDQ9BTW9 1192 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TUBB6Q9BUF5 446 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 EFCAB11Q9BUY7 163 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CAPS2Q9BXY5 557 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 EBPLQ9BY08 206 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 OR8D2Q9GZM6 311 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 DDX31Q9H8H2 851 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 CNOT10Q9H9A5 744 aaKnown RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 PROK2Q9HC23 129 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 MID1IP1Q9NPA3 183 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 PSMC3IPQ9P2W1 217 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 DCDC2Q9UHG0 476 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 BAIAP2L1Q9UHR4 511 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 ERRFI1Q9UJM3 462 aaPredicted RBP3.9□□□□□ -1.79
SPG11-211ENST00000558561 ANAPC2Q9UJX6 822 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms