RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MTHFSDQ2M296 383 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 KLHL38Q2WGJ6 581 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 Q3ZCU0 254 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 HSP90AA4PQ58FG1 418 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 LIN9Q5TKA1 542 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 PCSK4Q6UW60 755 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 MOB2Q70IA6 237 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 APTXQ7Z2E3 356 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 SCD5Q86SK9 330 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 NFE4Q86UQ8 179 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 POC1AQ8NBT0 407 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 CLEC18CQ8NCF0 446 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 OR2L3Q8NG85 312 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 OR7G2Q8NG99 324 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 OR13F1Q8NGS4 319 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 MAPK15Q8TD08 544 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 SCARB1Q8WTV0 552 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 SLCO2A1Q92959 643 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 KIAA1143Q96AT1 154 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 ZNF578Q96N58 590 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 MTMR9Q96QG7 549 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 MRPL37Q9BZE1 423 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 SLITRK2Q9H156 845 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 SMYD3Q9H7B4 428 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 NT5MQ9NPB1 228 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 C20orf96Q9NUD7 363 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 IL36GQ9NZH8 169 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 RCOR3Q9P2K3 495 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 SEC14L4Q9UDX3 406 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 CIDEBQ9UHD4 219 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 SLC7A8Q9UHI5 535 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 LNPEPQ9UIQ6 1025 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 ZNF221Q9UK13 617 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 VANGL2Q9ULK5 521 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TCF19Q9Y242 345 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 RASD1Q9Y272 281 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 CSDC2Q9Y534 153 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 GMPPBQ9Y5P6 360 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TRIP12Q14669 1992 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 KIF27Q86VH2 1401 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 A0A0J9YYE9 177 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CCDC182A6NF36 153 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR6C65A6NJZ3 312 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 K7ERI5 159 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CETN3O15182 167 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TNFSF12O43508 249 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 NMT2O60551 498 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 F10P00742 488 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CA1P00915 261 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 OAS1P00973 400 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 NGFP01138 241 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TRBC1P01850 177 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CRYABP02511 175 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 ERCC1P07992 297 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 STAG3L2P0CL84 134 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CCNB1P14635 433 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 MYOGP15173 224 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 XRCC1P18887 633 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 EIF2S2P20042 333 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 PRKACBP22694 351 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 EDNRAP25101 427 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 U2AF2P26368 475 aaKnown RBP eCLIP3.26□□□□□ -1.89
TDP1-217ENST00000557782 HMGB2P26583 209 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 CD1CP29017 333 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 HNRNPH3P31942 346 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 FCGR2CP31995 323 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 HSD17B2P37059 387 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 BDKRB1P46663 353 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 LEPRP48357 1165 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 DUSP3P51452 185 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 ACLYP53396 1101 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 PEX3P56589 373 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 RAB11AP62491 216 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 SSBP2P81877 361 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 COL10A1Q03692 680 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CUL1Q13616 776 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 RAB11BQ15907 218 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 HNRNPA1L2Q32P51 320 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 GLYR1Q49A26 553 aaPredicted RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 GTDC1Q4AE62 458 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TP53I3Q53FA7 332 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 UNC50Q53HI1 259 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TWF2Q6IBS0 349 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR8G2PQ6IF36 304 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CAPRIN2Q6IMN6 1127 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 PRR5LQ6MZQ0 368 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 UQCC3Q6UW78 93 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 LINC00523Q86TU6 105 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 GABRG1Q8N1C3 465 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 C15orf54Q8N8G6 183 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 KBTBD3Q8NAB2 608 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR5L2Q8NGL0 311 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR13A1Q8NGR1 328 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR9A1PQ8NGU1 263 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR2T11Q8NH01 316 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 OR6S1Q8NH40 331 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms