RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 UQCRC1P31930 480 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 CA8P35219 290 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 THBS2P35442 1172 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 DEFB103AP81534 67 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 PRDX1Q06830 199 aaKnown RBP15.2■□□□□ 0.02
SHMT2-232ENST00000557487 TEAD2Q15562 447 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 KLHL12Q53G59 568 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 PIP5KL1Q5T9C9 394 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 BCL2L15Q5TBC7 163 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 SFXN4Q6P4A7 337 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 C16orf62Q7Z3J2 963 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 CPOQ8IVL8 374 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 NRMQ8IXM6 262 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 OR52L1Q8NGH7 329 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 ADAMTS14Q8WXS8 1223 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 FCRL4Q96PJ5 515 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 MCHR1Q99705 422 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 ACTRT3Q9BYD9 372 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 OR51J1Q9H342 316 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 ACSL5Q9ULC5 683 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 MGAT4AQ9UM21 535 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 SLC27A6Q9Y2P4 619 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 GPSM3Q9Y4H4 160 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 EDDM13A0A1B0GTR0 161 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SMLR1H3BR10 107 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 CCL16O15467 120 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 TPD52L2O43399 206 aaKnown RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ITGA10O75578 1167 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ERAL1O75616 437 aaKnown RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SOX30O94993 753 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 CH25HO95992 272 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 PAHP00439 452 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 EIF4EP06730 217 aaKnown RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 HIST1H1TP22492 207 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 BTCP35070 178 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GCGRP47871 477 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 EIPR1Q53HC9 387 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 C9orf64Q5T6V5 341 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SLC48A1Q6P1K1 146 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 NIPAL3Q6P499 406 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ZNF793Q6ZN11 406 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GDF7Q7Z4P5 450 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 FGD2Q7Z6J4 655 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 VRK2Q86Y07 508 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 RNF113BQ8IZP6 322 aaKnown RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SIRT6Q8N6T7 355 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SAMD12Q8N8I0 201 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 AMER3Q8N944 861 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 NUP43Q8NFH3 380 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 OR5W2Q8NH69 310 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GANCQ8TET4 914 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 UBQLN3Q9H347 655 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ZFP64Q9NPA5 681 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GLTPQ9NZD2 209 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GPR89AB7ZAQ6 455 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 UBL3O95164 117 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 IFNA7P01567 189 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SERPIND1P05546 499 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SLC35G4P0C7Q5 338 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GPR89BP0CG08 455 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 TRHRP34981 398 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 AHRP35869 848 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 MMP15P51511 669 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 HSF2Q03933 536 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 RGS1Q08116 209 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 LRRC32Q14392 662 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 HEPHL1Q6MZM0 1159 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ASB18Q6ZVZ8 466 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 OLIG3Q7RTU3 272 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 NR2C2APQ86WQ0 139 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 NKAIN4Q8IVV8 208 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 CMIPQ8IY22 773 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 SPERTQ8NA61 448 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ZNF680Q8NEM1 530 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 BBS1Q8NFJ9 593 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 OR51G2Q8NGK0 314 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 CNRIP1Q96F85 164 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 MFRPQ9BY79 579 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ABRACLQ9P1F3 81 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 ZNF624Q9P2J8 865 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 MSRAQ9UJ68 235 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 GPR55Q9Y2T6 319 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-232ENST00000557487 CSNK1G3Q9Y6M4 447 aa15.19■□□□□ 0.02
SHMT2-232ENST00000557487 A0A1W2PR48 441 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 DAPL1A0PJW8 107 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 UNC119BA6NIH7 251 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 BTN3A3O00478 584 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 SOCS6O14544 535 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 LCMT2O60294 686 aaKnown RBP15.18■□□□□ 0.02
SHMT2-232ENST00000557487 TCRBP04435 133 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 UGT2B7P16662 529 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 PSMB5P28074 263 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 GPR4P46093 362 aa15.18■□□□□ 0.02
SHMT2-232ENST00000557487 ELAVL3Q14576 367 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms