RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ZCCHC7Q8N3Z6 543 aaKnown RBP8.16□□□□□ -1.1
NEDD1-211ENST00000557454 RNF175Q8N4F7 328 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 OR52R1Q8NGF1 315 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 UBASH3BQ8TF42 649 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 NEU4Q8WWR8 484 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-211ENST00000557454 ALG3Q92685 438 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF669Q96BR6 464 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-211ENST00000557454 REXO5Q96IC2 774 aaKnown RBP8.16□□□□□ -1.1
NEDD1-211ENST00000557454 NPAS1Q99742 590 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 SRXN1Q9BYN0 137 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 PLK3Q9H4B4 646 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 NTMQ9P121 344 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 FBXO9Q9UK97 447 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-211ENST00000557454 ASB4Q9Y574 426 aa8.16□□□□□ -1.1
NEDD1-211ENST00000557454 WNK2Q9Y3S1 2297 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 NPEPPSL1A6NEC2 478 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 PLPP1O14494 284 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 NME6O75414 186 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 ZSCAN5DPP0CG00 497 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 PCNAP12004 261 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 CPMP14384 443 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 KRT20P35900 424 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 CETN2P41208 172 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 GPR6P46095 362 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 XKP51811 444 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 RWDD2BP57060 319 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 CARD18P57730 90 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 CORO7P57737 925 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 MGAT2Q10469 447 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 SLC9A3R2Q15599 337 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 TAF9Q16594 264 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 MRM1Q6IN84 353 aaKnown RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.15□□□□□ -1.11e-12■■■■■ 35.3
NEDD1-211ENST00000557454 PTCD3Q96EY7 689 aaKnown RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 RACGAP1Q9H0H5 632 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 CXorf36Q9H7Y0 433 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 FN3KRPQ9HA64 309 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 WDR41Q9HAD4 459 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 LYARQ9NX58 379 aaKnown RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 MAT2BQ9NZL9 334 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 FLRT3Q9NZU0 649 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 FBXO5Q9UKT4 447 aa8.15□□□□□ -1.1
NEDD1-211ENST00000557454 GPR55Q9Y2T6 319 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-211ENST00000557454 A0A0A6YYD5 115 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 A0A1B0GUS0 222 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 CIB4A0PJX0 185 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 GOLGA6L10A6NI86 522 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 SDR42E2A6NKP2 422 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 C9JVG2 144 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 GOLGA6L19H0YKK7 550 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 J3QLI3 93 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 KERAO60938 352 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 PRKD3O94806 890 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 OR4A8P0C604 315 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 SHC1P29353 583 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 STIP1P31948 543 aaKnown RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 CASP2P42575 452 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 EMDP50402 254 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 LMO4P61968 165 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 BASP1P80723 227 aaKnown RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 SLC25A3Q00325 362 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 OASLQ15646 514 aaKnown RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 EFNB3Q15768 340 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 ADIPOQQ15848 244 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 FBXO48Q5FWF7 155 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 ARL13AQ5H913 290 aaPredicted RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 TCHHL1Q5QJ38 904 aaPredicted RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 PDSS1Q5T2R2 415 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 OLFML2AQ68BL7 652 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 VHLLQ6RSH7 139 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 SASS6Q6UVJ0 657 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 NPSR1Q6W5P4 371 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 RBM43Q6ZSC3 357 aaKnown RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 FCRLAQ7L513 359 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 DUSP19Q8WTR2 217 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 RGMAQ96B86 450 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 KLHL15Q96M94 604 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 RNF145Q96MT1 663 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 LRRC1Q9BTT6 524 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 EFCAB11Q9BUY7 163 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF717Q9BY31 904 aaPredicted RBP8.14□□□□□ -1.11
NEDD1-211ENST00000557454 BEX1Q9HBH7 125 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 GP6Q9HCN6 339 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 CA10Q9NS85 328 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 PAK5Q9P286 719 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 PRODH2Q9UF12 536 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 OPN4Q9UHM6 478 aa8.14□□□□□ -1.11
NEDD1-211ENST00000557454 LYSTQ99698 3801 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 IGHV3-15A0A0B4J1V0 119 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 ZCWPW2A0A1B0GU75 182 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CLDN34H7C241 214 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms