RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 POLR3FQ9H1D9 316 aaPredicted RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 GANQ9H2C0 597 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MINDY3Q9H8M7 445 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MED17Q9NVC6 651 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CHCHD3Q9NX63 227 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 AIPL1Q9NZN9 384 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 VPS18Q9P253 973 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 GMEB2Q9UKD1 530 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 BZW2Q9Y6E2 419 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 CEP290O15078 2479 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MIA3Q5JRA6 1907 aa2.78□□□□□ -1.97
VRK1-207ENST00000557352 BRCA2P51587 3418 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 TTC26A0AVF1 554 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ZNF233A6NK53 670 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 BTNL10A8MVZ5 291 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 K7ERI5 159 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 MCF2LO15068 1137 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SLC16A4O15374 487 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ZSCAN12O43309 604 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 NOL4O94818 638 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SLU7O95391 586 aaKnown RBP2.77□□□□□ -1.97
VRK1-207ENST00000557352 FHP07954 510 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 CCDC172P0C7W6 258 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 P0C879 139 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 MCF2P10911 925 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ODC1P11926 461 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 KRT13P13646 458 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 UCHL3P15374 230 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 CASP14P31944 242 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ID1P41134 155 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 OR3A1P47881 315 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 NPBWR1P48145 328 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 FNTAP49354 379 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 GPC3P51654 580 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 CYP24A1Q07973 514 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 LAMTOR4Q0VGL1 99 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ABRQ12979 859 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SYCP1Q15431 976 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SNRNP35Q16560 246 aaKnown RBP2.77□□□□□ -1.97
VRK1-207ENST00000557352 MAPK6Q16659 721 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 EXOC3L4Q17RC7 722 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ISXQ2M1V0 245 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 DCAF4L1Q3SXM0 396 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 EPC2Q52LR7 807 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 MARCH8Q5T0T0 291 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 HECTD3Q5T447 861 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ARMC3Q5W041 872 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 TXNRD3NBQ6F5E7 133 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 PPP1R2P3Q6NXS1 205 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 C11orf88Q6PI97 169 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 WDR59Q6PJI9 974 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 CD302Q8IX05 232 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 NELFCDQ8IXH7 590 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SYCP3Q8IZU3 236 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ZNF491Q8N8L2 437 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 SPC24Q8NBT2 197 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 NEK11Q8NG66 645 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 LINC01006Q8NI28 216 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 GPR148Q8TDV2 347 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 RSPH1Q8WYR4 309 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 RIT1Q92963 219 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 RBM18Q96H35 190 aaKnown RBP2.77□□□□□ -1.97
VRK1-207ENST00000557352 INTS14Q96SY0 518 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 CBWD1Q9BRT8 395 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ASB7Q9H672 318 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 HAUS4Q9H6D7 363 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 VIPAS39Q9H9C1 493 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 LMAN1LQ9HAT1 526 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 S100A14Q9HCY8 104 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 GCNT4Q9P109 453 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 MOKQ9UQ07 419 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD36A6QL64 1941 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 ATG2AQ2TAZ0 1938 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 PLXNA4Q9HCM2 1894 aa2.77□□□□□ -1.97
VRK1-207ENST00000557352 COL4A6Q14031 1691 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 MROH7Q68CQ1 1323 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 A0A0U1RQG5 324 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 A0A1B0GUA9 196 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 TMEM150BA6NC51 233 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 C5orf52A6NGY3 159 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 LRRIQ4A6NIV6 560 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CCDC169A6NNP5 214 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 LRRIQ3A6PVS8 624 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 F8VZ95 297 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CLDN3O15551 220 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 PROS1P07225 676 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 LYNP07948 512 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CLTAP09496 248 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ZNF286BP0CG31 522 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 SMIM10L2AP0DMW4 78 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 SMIM10L2BP0DMW5 78 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 FERP16591 822 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ACKR3P25106 362 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CYLC1P35663 651 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 CASP4P49662 377 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 FHITP49789 147 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 SLC25A1P53007 311 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 HADHBP55084 474 aaKnown RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 KRT83P78385 493 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CXCL6P80162 114 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms