RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SSTR2P30874 369 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 RFX3P48380 749 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 STARP49675 285 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 IDH3AP50213 366 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 DSCR4P56555 118 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 PRR5P85299 388 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 EMX2Q04743 252 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 STX5Q13190 355 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 GANABQ14697 944 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 TMEM44Q2T9K0 475 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 SMU1Q2TAY7 513 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 VPS26BQ4G0F5 336 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 EPGNQ6UW88 154 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 PLXDC2Q6UX71 529 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 SZRD1Q7Z422 152 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 MAVSQ7Z434 540 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 MARCH3Q86UD3 253 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 INTS1Q8N201 2190 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 OR4K17Q8NGC6 315 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 CEP70Q8NHQ1 597 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 ZPLD1Q8TCW7 415 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 GPR151Q8TDV0 419 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 OR5P2Q8WZ92 322 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 SLC9A6Q92581 669 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 SFXN2Q96NB2 322 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 DSN1Q9H410 356 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 AKTIPQ9H8T0 292 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 C3orf14Q9HBI5 128 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 ZCCHC3Q9NUD5 404 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 FBXO34Q9NWN3 711 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 NOP53Q9NZM5 478 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 TRIM33Q9UPN9 1127 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 RPH3AQ9Y2J0 694 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 L3MBTL1Q9Y468 752 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CLCA1A8K7I4 914 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ALG1L2C9J202 215 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 H0Y3Z8 333 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ANKRD28O15084 1053 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 OXSR1O95747 527 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 PRPS1L1P21108 318 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 BMP5P22003 454 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CHMP24386 653 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 GCKP35557 465 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ASCL1P50553 236 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 DIO3P55073 304 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CLDN15P56746 228 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CLDN8P56748 225 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 TLE4Q04727 773 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 MAD2L1Q13257 205 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 LASP1Q14847 261 aaKnown RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CCNJQ5T5M9 372 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CPTPQ5TA50 214 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 AAGABQ6PD74 315 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ZCCHC12Q6PEW1 402 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 FIGNL1Q6PIW4 674 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ENPP6Q6UWR7 440 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 OR4C3Q8NH37 302 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 SFXN5Q8TD22 340 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 C1GALT1C1Q96EU7 318 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 MARK4Q96L34 752 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 LRRC37BQ96QE4 947 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 OR52B2Q96RD2 323 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 STACQ99469 402 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 KLHDC3Q9BQ90 382 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 YIPF4Q9BSR8 244 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 BHLHE41Q9C0J9 482 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 SERHL2Q9H4I8 314 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 CALHM2Q9HA72 323 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 MEAF6Q9HAF1 191 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 DUSP22Q9NRW4 184 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ATAD3AQ9NVI7 634 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 GPATCH2Q9NW75 528 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 MED11Q9P086 117 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ZNF629Q9UEG4 869 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
SHMT2-224ENST00000556737 PCNX3Q9H6A9 2034 aa9.34□□□□□ -0.91
SHMT2-224ENST00000556737 ANKHD1Q8IWZ3 2542 aaKnown RBP9.33□□□□□ -0.92
SHMT2-224ENST00000556737 OR2M5A3KFT3 312 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 H0YC42 278 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SDHDO14521 159 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 ZNF195O14628 629 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 DVL2O14641 736 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 CCDC22O60826 627 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 ANGPTL1O95841 491 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 ALOX5P09917 674 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 HK1P19367 917 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 TBXA2RP21731 343 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 LCN1P31025 176 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 PRIM2P49643 509 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 TPD52P55327 224 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms