RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 APOOLQ6UXV4 268 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 ZNF517Q6ZMY9 492 aaPredicted RBP12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 NKAIN4Q8IVV8 208 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 MORN4Q8NDC4 146 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 DIO2Q92813 273 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 FOXJ2Q9P0K8 574 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 COPS7AQ9UBW8 275 aa12.74□□□□□ -0.37
EFCAB11-212ENST00000556639 LOC100130705A0A1B0GUX0 176 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 SAGE2PA6NJ88 616 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 IGFBP1P08833 259 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 JMJD7P0C870 316 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 DRD5P21918 477 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 CBLP22681 906 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 RPS18P62269 152 aaKnown RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 ILKQ13418 452 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 TMEM205Q6UW68 189 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 CPEB2Q7Z5Q1 589 aaKnown RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 B3GNT7Q8NFL0 401 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 UBE2FQ969M7 185 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 FKBP10Q96AY3 582 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 RTN4RQ9BZR6 473 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 TRIM45Q9H8W5 580 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 GPN3Q9UHW5 284 aaPredicted RBP12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 SDK2Q58EX2 2172 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 SH3PXD2BA1X283 911 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 FRG2CA6NGY1 282 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 H0YAE9 185 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 OR10H3O60404 316 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 CYP7B1O75881 506 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 CELA2AP08217 269 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 ATP12AP54707 1039 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 RAD23AP54725 363 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 RNF4P78317 190 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 NCF4Q15080 339 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 DECR1Q16698 335 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 KRT80Q6KB66 452 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 TMEM154Q6P9G4 183 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 PLEKHM3Q6ZWE6 761 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 GPA33Q99795 319 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 KLHDC3Q9BQ90 382 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 ASPMQ8IZT6 3477 aa12.73□□□□□ -0.37
EFCAB11-212ENST00000556639 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 A0A087WUU8 490 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 MAGEA13PA6NCF6 341 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 AP3D1O14617 1153 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 PLD2O14939 933 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 OIP5O43482 229 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ABCB7O75027 752 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 REM1O75628 298 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ELK4P28324 431 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 NBL1P41271 181 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 RAPSNQ13702 412 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 CD226Q15762 336 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ZNF141Q15928 474 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 HLA-DQA1Q5Y7H0 255 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 SLC29A4Q7RTT9 530 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 GDF7Q7Z4P5 450 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 CCDC71Q8IV32 467 aaPredicted RBP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ART5Q96L15 291 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 RDH12Q96NR8 316 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 DNAJB12Q9NXW2 375 aaKnown RBP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 CFL2Q9Y281 166 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 A0A1W2PRQ8 180 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 TMEM200CA6NKL6 621 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 SOX30O94993 753 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 IL33O95760 270 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 RYKP34925 604 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 NPRL3Q12980 569 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 DGCR6Q14129 220 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 FGFBP1Q14512 234 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 EIPR1Q53HC9 387 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 WDR88Q6ZMY6 472 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ZER1Q7Z7L7 766 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 ZNF555Q8NEP9 628 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 OR4K5Q8NGD3 323 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 SLC41A3Q96GZ6 507 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 LPAR4Q99677 370 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 WDR54Q9H977 334 aa12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 PAPOLBQ9NRJ5 636 aaKnown RBP12.72□□□□□ -0.37
EFCAB11-212ENST00000556639 TRBV11-1A0A0K0K1C0 115 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms