RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 TUBGCP3Q96CW5 907 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 STARD4Q96DR4 205 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 MTERF3Q96E29 417 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 C16orf58Q96GQ5 468 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 ZC3HAV1LQ96H79 300 aaKnown RBP9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 PRPF18Q99633 342 aaKnown RBP9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 SLC39A3Q9BRY0 314 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 MED18Q9BUE0 208 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 L2HGDHQ9H9P8 463 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 HHATLQ9HCP6 504 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 MKS1Q9NXB0 559 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 KLHL28Q9NXS3 571 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 C6orf203Q9P0P8 240 aaPredicted RBP9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 PROCRQ9UNN8 238 aa9.53□□□□□ -0.88
SPTLC2-205ENST00000556607 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 SCAMP2O15127 329 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 TBX19O60806 448 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ANKRD17O75179 2603 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 GOSR1O95249 250 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 SYNGR4O95473 234 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 HMGN2P05204 90 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 NUDT17P0C025 328 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 FCGR2AP12318 317 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 TBXA2RP21731 343 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ME2P23368 584 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 SOAT1P35610 550 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 CD79BP40259 229 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 KIR2DL2P43627 348 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 CTBP2P56545 445 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 TP53BP2Q13625 1128 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 PDE7AQ13946 482 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 LASP1Q14847 261 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 PDSS1Q5T2R2 415 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 CPTPQ5TA50 214 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 IL23RQ5VWK5 629 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 MFSD12Q6NUT3 480 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ZCCHC12Q6PEW1 402 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 RNF165Q6ZSG1 346 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF614Q8N883 585 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF610Q8N9Z0 462 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 B4GALNT2Q8NHY0 566 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 PHOSPHO1Q8TCT1 267 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ADAMTS15Q8TE58 950 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 CDS1Q92903 461 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 FAM120BQ96EK7 910 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 GIMAP5Q96F15 307 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF764Q96H86 408 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 FCRL1Q96LA6 429 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 PPP1R36Q96LQ0 422 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ALPK1Q96QP1 1244 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ROPN1BQ9BZX4 212 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 KLHL4Q9C0H6 718 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ROPN1Q9HAT0 212 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 UBQLN4Q9NRR5 601 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ATAD3AQ9NVI7 634 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 FBXO34Q9NWN3 711 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF226Q9NYT6 803 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 ATP6V1HQ9UI12 483 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 MCTS1Q9ULC4 181 aaKnown RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 CLEC4AQ9UMR7 237 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 FAF1Q9UNN5 650 aaPredicted RBP9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 EMC9Q9Y3B6 208 aa9.52□□□□□ -0.89
SPTLC2-205ENST00000556607 WDR91A4D1P6 747 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ALG1L2C9J202 215 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 C16orf97H3BN30 126 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 GTPBP1O00178 669 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 TNFSF11O14788 317 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ATE1O95260 518 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 HSPA4LO95757 839 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 HRGP04196 525 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 LAMP1P11279 417 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 FRKP42685 505 aaPredicted RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 CCT3P49368 545 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 FGFBP1Q14512 234 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 PTGR1Q14914 329 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 DEFB113Q30KQ7 82 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 PGS1Q32NB8 556 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 LSM12Q3MHD2 195 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 UGT3A2Q3SY77 523 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ANKRD34AQ69YU3 496 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ZAR1Q86SH2 424 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 NUDCD3Q8IVD9 361 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 MISPQ8IVT2 679 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 METTL25Q8N6Q8 603 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ZNF527Q8NB42 609 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 OR10D3Q8NH80 312 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 OR5AK3PQ8NH89 298 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 RFWD2Q8NHY2 731 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 ZBTB8AQ96BR9 441 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 REXO5Q96IC2 774 aaKnown RBP9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 C3orf30Q96M34 536 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 RNF145Q96MT1 663 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 WFIKKN1Q96NZ8 548 aa9.51□□□□□ -0.89
SPTLC2-205ENST00000556607 CXXC4Q9H2H0 198 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms