RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PSMB9P28065 219 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 HTR2AP28223 471 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 FOXL2P58012 376 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 ZNF574Q6ZN55 896 aaPredicted RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PRR23CQ6ZRP0 262 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 PRSS48Q7RTY5 328 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 KIF18BQ86Y91 864 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 CACTIN-AS1Q8N1I8 211 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 SAP25Q8TEE9 199 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 IPCEF1Q8WWN9 437 aaPredicted RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 EDAQ92838 391 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 SLC41A2Q96JW4 573 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 DPYSL5Q9BPU6 564 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 LMF2Q9BU23 707 aaKnown RBP16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 FUNDC2Q9BWH2 189 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 GAREM1Q9H706 876 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 ACOT13Q9NPJ3 140 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 FGF21Q9NSA1 209 aa16.97■□□□□ 0.31
SDR39U1-220ENST00000556548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 A0A1W2PPW3 197 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 CDHR4A6H8M9 788 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 CLCA1A8K7I4 914 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 BOLA2-SMG1P6H3BVE0 249 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 GPR4P46093 362 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 PLAURQ03405 335 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 WDR74Q6RFH5 385 aaPredicted RBP16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 CASP12Q6UXS9 341 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 ERI1Q8IV48 349 aaKnown RBP16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 NRMQ8IXM6 262 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 B3GNT7Q8NFL0 401 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 ITPAQ9BY32 194 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 CCNB1IP1Q9NPC3 277 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 DNAJC27Q9NZQ0 273 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 SERTAD3Q9UJW9 196 aa16.96■□□□□ 0.31
SDR39U1-220ENST00000556548 BLACEA4D250 179 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 PRAMEF2O60811 474 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 NOL3O60936 208 aaKnown RBP16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 ENTPD6O75354 484 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 AK1P00568 194 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 SIGLEC14Q08ET2 396 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 GINS1Q14691 196 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 NR1D2Q14995 579 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 SLX4IPQ5VYV7 408 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 ACSM5Q6NUN0 579 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 KANSL1Q7Z3B3 1105 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 RANBP3LQ86VV4 465 aaPredicted RBP16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 CROCCP3Q8IVE0 287 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 C1orf210Q8IVY1 113 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 EID2Q8N6I1 236 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 TCEANCQ8N8B7 351 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 ZNF420Q8TAQ5 688 aaPredicted RBP16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 CNOT9Q92600 299 aaKnown RBP16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 LMF1Q96S06 567 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 OR10H1Q9Y4A9 318 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 PCDHGB1Q9Y5G3 927 aa16.96■□□□□ 0.3
SDR39U1-220ENST00000556548 SEC16AO15027 2179 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 LY6G6EA0A0G2JKS1 128 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CT45A8P0DMV1 189 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CT45A9P0DMV2 189 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 EFNA3P52797 238 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CSNK2BP67870 215 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 COX10Q12887 443 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 NR0B2Q15466 257 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 OR1Q1Q15612 314 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CT45A2Q5DJT8 189 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CLEC12AQ5QGZ9 265 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 LINC00471Q8N535 108 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 HOXB13Q92826 284 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 HSPBAP1Q96EW2 488 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 PLCXD1Q9NUJ7 323 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CLN6Q9NWW5 311 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 TAS2R16Q9NYV7 291 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 IL20RAQ9UHF4 553 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 U3KQA8 63 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 OR5F1O95221 314 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 IFI6P09912 130 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 OMPP47874 163 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 CCL7P80098 99 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 FUT7Q11130 342 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 ST3GAL4Q11206 333 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 Q6ZNX1 250 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 SHISA6Q6ZSJ9 500 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 PRSS42Q7Z5A4 293 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 STX19Q8N4C7 294 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 ZNF615Q8N8J6 731 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 OR4C6Q8NH72 309 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 PIGXQ8TBF5 258 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 GNPDA2Q8TDQ7 276 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 PTPMT1Q8WUK0 201 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 ACOT11Q8WXI4 607 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 ZNF501Q96CX3 271 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 SENP5Q96HI0 755 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 DOK1Q99704 481 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 DUSP23Q9BVJ7 150 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 OR8D2Q9GZM6 311 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 ZNF304Q9HCX3 659 aa16.95■□□□□ 0.3
SDR39U1-220ENST00000556548 SUSD2Q9UGT4 822 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms