RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PCNX3Q9H6A9 2034 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 A0A087WZY1 265 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 A0A0J9YW62 118 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 GNG14A0A1W2PPG7 69 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 ADAMDEC1O15204 470 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 TP73O15350 636 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 PLOD3O60568 738 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 LYZL6O75951 148 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CTAGE8P0CG41 777 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 MPIP34949 423 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 SFTPDP35247 375 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 ZNF41P51814 821 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CARD18P57730 90 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CSTF3Q12996 717 aaKnown RBP12.36□□□□□ -0.43
ACTN1-219ENST00000556432 TRAF3Q13114 568 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 ITGADQ13349 1161 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 SQLEQ14534 574 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 P2RY6Q15077 328 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 METTL2BQ6P1Q9 378 aaKnown RBP12.36□□□□□ -0.43
ACTN1-219ENST00000556432 C12orf54Q6X4T0 127 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CCDC91Q7Z6B0 441 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CTAGE4Q8IX94 777 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 TUSC5Q8IXB3 177 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CDYL2Q8N8U2 506 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 OR4F6Q8NGB9 312 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 EML4Q9HC35 981 aaKnown RBP12.36□□□□□ -0.43
ACTN1-219ENST00000556432 SLC35C2Q9NQQ7 365 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CBLN4Q9NTU7 201 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 KLHL13Q9P2N7 655 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 SNX6Q9UNH7 406 aa12.36□□□□□ -0.43
ACTN1-219ENST00000556432 CCDC189A1A4V9 331 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 SLC35F4A4IF30 521 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 IL33O95760 270 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 C2P06681 752 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 CSF3P09919 207 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 TTKP33981 857 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 RAC1P63000 192 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 RNPS1Q15287 305 aaKnown RBP12.35□□□□□ -0.43
ACTN1-219ENST00000556432 ZNF239Q16600 458 aaKnown RBP12.35□□□□□ -0.43
ACTN1-219ENST00000556432 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 UBAP2Q5T6F2 1119 aaKnown RBP12.35□□□□□ -0.43
ACTN1-219ENST00000556432 MROH9Q5TGP6 573 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 TMEM107Q6UX40 140 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 SEZ6L2Q6UXD5 910 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 GATSQ8NAP1 163 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 PROX1Q92786 737 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
ACTN1-219ENST00000556432 KLHL15Q96M94 604 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 BRF2Q9HAW0 419 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 TIGARQ9NQ88 270 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 DDX18Q9NVP1 670 aaKnown RBP12.35□□□□□ -0.43
ACTN1-219ENST00000556432 PCTPQ9UKL6 214 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 PLCE1Q9P212 2302 aa12.35□□□□□ -0.43
ACTN1-219ENST00000556432 IGLV3-32A0A0A0MS00 114 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 A0A1W2PRB8 838 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 ESYT3A0FGR9 886 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 PCDH7O60245 1069 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 KLHL2O95198 593 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 OTCP00480 354 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 JUNP05412 331 aaKnown RBP12.34□□□□□ -0.43
ACTN1-219ENST00000556432 FABP6P51161 128 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 NCBP2P52298 156 aaKnown RBP eCLIP12.34□□□□□ -0.43
ACTN1-219ENST00000556432 PRR5P85299 388 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 CALCOCO2Q13137 446 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 GGTA1PQ4G0N0 100 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 RPS27LQ71UM5 84 aaKnown RBP12.34□□□□□ -0.43
ACTN1-219ENST00000556432 TDRPQ86YL5 185 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 MUC15Q8N387 334 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 CDC26Q8NHZ8 85 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 RNF128Q8TEB7 428 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 SH3YL1Q96HL8 342 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-219ENST00000556432 NPAS1Q99742 590 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 DHRS9Q9BPW9 319 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 C3orf14Q9HBI5 128 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 VPS29Q9UBQ0 182 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
ACTN1-219ENST00000556432 YLPM1P49750 1951 aaKnown RBP12.34□□□□□ -0.43
ACTN1-219ENST00000556432 A0A096LPK6 155 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 TCF21O43680 179 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 SMIM24O75264 130 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 PRKD3O94806 890 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 KCNH1O95259 989 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 GSTA2P09210 222 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 COL6A2P12110 1019 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
ACTN1-219ENST00000556432 TSPAN8P19075 237 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 STX2P32856 288 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 GABRA3P34903 492 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 HEPACAMQ14CZ8 416 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms