RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 EIPR1Q53HC9 387 aa8.78□□□□□ -1
SRP54-210ENST00000556380 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
SRP54-210ENST00000556380 DCST2Q5T1A1 773 aa8.78□□□□□ -1
SRP54-210ENST00000556380 C1QL3Q5VWW1 255 aa8.78□□□□□ -1
SRP54-210ENST00000556380 OR5M10Q6IEU7 315 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLC2A7Q6PXP3 512 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ZNF621Q6ZSS3 439 aa8.78□□□□□ -1
SRP54-210ENST00000556380 MSRB3Q8IXL7 192 aa8.78□□□□□ -1
SRP54-210ENST00000556380 NEIL3Q8TAT5 605 aa8.78□□□□□ -1
SRP54-210ENST00000556380 FAM57AQ8TBR7 257 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ZFP90Q8TF47 636 aa8.78□□□□□ -1
SRP54-210ENST00000556380 DUSP19Q8WTR2 217 aa8.78□□□□□ -1
SRP54-210ENST00000556380 JADE3Q92613 823 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ITCHQ96J02 903 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLC35G5Q96KT7 338 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLC35A5Q9BS91 424 aa8.78□□□□□ -1
SRP54-210ENST00000556380 G6PC3Q9BUM1 346 aa8.78□□□□□ -1
SRP54-210ENST00000556380 TMEM120AQ9BXJ8 343 aa8.78□□□□□ -1
SRP54-210ENST00000556380 OR2B2Q9GZK3 357 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLC6A15Q9H2J7 730 aa8.78□□□□□ -1
SRP54-210ENST00000556380 OR51I1Q9H343 314 aa8.78□□□□□ -1
SRP54-210ENST00000556380 CCDC167Q9P0B6 97 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLAMF8Q9P0V8 285 aa8.78□□□□□ -1
SRP54-210ENST00000556380 B4GALT7Q9UBV7 327 aa8.78□□□□□ -1
SRP54-210ENST00000556380 SLC5A6Q9Y289 635 aa8.78□□□□□ -1
SRP54-210ENST00000556380 MRPS18CQ9Y3D5 142 aaKnown RBP8.78□□□□□ -1
SRP54-210ENST00000556380 PCDHGB3Q9Y5G1 929 aa8.78□□□□□ -1
SRP54-210ENST00000556380 GMEB1Q9Y692 573 aa8.78□□□□□ -1
SRP54-210ENST00000556380 UNC79Q9P2D8 2635 aa8.78□□□□□ -1
SRP54-210ENST00000556380 A0A096LPI6 279 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TRBV5-3A0A0A0MS03 114 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TRGV5A0A0B4J1U4 118 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 A0A1B0GUH1 482 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 A0A1W2PP18 115 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 HMGN4O00479 90 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 SCO2O43819 266 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 FCMRO60667 390 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 AK1P00568 194 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 OR12D1P0DN82 309 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TROVE2P10155 538 aaKnown RBP eCLIP8.77□□□□□ -1.01
SRP54-210ENST00000556380 NCF2P19878 526 aaPredicted RBP8.77□□□□□ -1.01
SRP54-210ENST00000556380 GDF1P27539 372 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 MAGEA8P43361 318 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 RFX3P48380 749 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 ARFIP2P53365 341 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 B3GALT5-AS1P59052 145 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TXNL4AP83876 142 aaKnown RBP8.77□□□□□ -1.01
SRP54-210ENST00000556380 FUT5Q11128 374 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 MAPK11Q15759 364 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 GXYLT1Q4G148 440 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 NHSL2Q5HYW2 709 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 PAGE3Q5JUK9 113 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 COX20Q5RI15 118 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.77□□□□□ -1.01
SRP54-210ENST00000556380 LRIF1Q5T3J3 769 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TNFAIP8L2Q6P589 184 aaPredicted RBP8.77□□□□□ -1.01
SRP54-210ENST00000556380 DLEU7Q6UYE1 221 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 OLIG3Q7RTU3 272 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 YRDCQ86U90 279 aaKnown RBP8.77□□□□□ -1.01
SRP54-210ENST00000556380 RNF130Q86XS8 419 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TRIML2Q8N7C3 387 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 FAM83FQ8NEG4 500 aaPredicted RBP8.77□□□□□ -1.01
SRP54-210ENST00000556380 OR2M3Q8NG83 312 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 XAGE5Q8WWM1 108 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 RAB8BQ92930 207 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 SPDL1Q96EA4 605 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 NMUR2Q9GZQ4 415 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 ZNF350Q9GZX5 532 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 HOXD1Q9GZZ0 328 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 SAP130Q9H0E3 1048 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 DSN1Q9H410 356 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 RABEP2Q9H5N1 569 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 RMND5AQ9H871 391 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 SDHAF3Q9NRP4 125 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 SLC25A37Q9NYZ2 338 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 KCNE5Q9UJ90 142 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TINAGQ9UJW2 476 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 TRIM33Q9UPN9 1127 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 PCDHB14Q9Y5E9 798 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 NCKAP5O14513 1909 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 FREM3P0C091 2139 aa8.77□□□□□ -1.01
SRP54-210ENST00000556380 NPIPA5A0A0B4J1W7 369 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TRGV8A0A0C4DH27 118 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 CENPVL1A0A0U1RR11 272 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 A0A1W2PQD3 144 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 NPIPA2E9PIF3 369 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 NPIPA7E9PJI5 369 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 NPIPA3F8WFD2 350 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 STX11O75558 287 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TRAPPC6AO75865 159 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 KRT75O95678 551 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 AGR2O95994 175 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 NPIPA8P0DM63 369 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 ABOP16442 354 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 MSX1P28360 303 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 SRD5A2P31213 254 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 CHI3L1P36222 383 aaPredicted RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 DCTP40126 519 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms