RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DPP4P27487 766 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 GRNP28799 593 aaKnown RBP10.47□□□□□ -0.73
SLIRP-205ENST00000556310 S100A3P33764 101 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 GFRA1P56159 465 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 DSCR4P56555 118 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-205ENST00000556310 PPP2R2AP63151 447 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 PHC1P78364 1004 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 C17orf67Q0P5P2 114 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 PMPCAQ10713 525 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 SF3B4Q15427 424 aaKnown RBP eCLIP10.47□□□□□ -0.73
SLIRP-205ENST00000556310 SLC9B1Q4ZJI4 515 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 RIPPLY2Q5TAB7 128 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 NXNQ6DKJ4 435 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 AAGABQ6PD74 315 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ENPP6Q6UWR7 440 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 APOOLQ6UXV4 268 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ZAR1Q86SH2 424 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 GALNT10Q86SR1 603 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ANKRD46Q86W74 232 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ADAMTS15Q8TE58 950 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 DYDC1Q8WWB3 177 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 SLC35G5Q96KT7 338 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 SFXN2Q96NB2 322 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ZBTB18Q99592 522 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 RTN4RQ9BZR6 473 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 DSN1Q9H410 356 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 PTGES2Q9H7Z7 377 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 UBQLN4Q9NRR5 601 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ALKBH4Q9NXW9 302 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 CAMK2AQ9UQM7 478 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 USH1CQ9Y6N9 552 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 TEX15Q9BXT5 2789 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 KIAA1549Q9HCM3 1950 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 ABCA12Q86UK0 2595 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 A0A1W2PQD3 144 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 SCDO00767 359 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 DIAPH2O60879 1101 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 SASH3O75995 380 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 CPN1P15169 458 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 ATP6V1C1P21283 382 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 CHMP24386 653 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 ADH7P40394 386 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 NME5P56597 212 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 UFM1P61960 85 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 LAPTM4AQ15012 233 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 GSTA3Q16772 222 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 PDCD4Q53EL6 469 aaKnown RBP10.46□□□□□ -0.73
SLIRP-205ENST00000556310 DCST2Q5T1A1 773 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 CCNJQ5T5M9 372 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 C6orf120Q7Z4R8 191 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 LACC1Q8IV20 430 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 CCDC71Q8IV32 467 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-205ENST00000556310 MISPQ8IVT2 679 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 GLB1L3Q8NCI6 653 aaPredicted RBP10.46□□□□□ -0.73
SLIRP-205ENST00000556310 OR5D16Q8NGK9 328 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 OR10Q1Q8NGQ4 319 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 OR4C3Q8NH37 302 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 LILRB4Q8NHJ6 448 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 DUSP19Q8WTR2 217 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 C1GALT1C1Q96EU7 318 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 WDYHV1Q96HA8 205 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 CCDC115Q96NT0 180 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 OR7D2Q96RA2 312 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 OR52B2Q96RD2 323 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 SERHL2Q9H4I8 314 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 SLCO1B3Q9NPD5 702 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 INTS9Q9NV88 658 aaKnown RBP10.46□□□□□ -0.73
SLIRP-205ENST00000556310 FBXO34Q9NWN3 711 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 MED11Q9P086 117 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 BTNL2Q9UIR0 455 aa10.46□□□□□ -0.73
SLIRP-205ENST00000556310 INTS1Q8N201 2190 aaKnown RBP10.46□□□□□ -0.74
SLIRP-205ENST00000556310 A0A0G2JNJ9 132 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 CD8B2A6NJW9 211 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 DUXAA6NLW8 204 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 FAM90A27PA6NNH2 459 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 C9JVG2 144 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 HNRNPRO43390 633 aaKnown RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 NDUFB5O43674 189 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ZIC3O60481 467 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 TGDSO95455 350 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 EPPINO95925 133 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 AK1P00568 194 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 PGRP06401 933 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 HPGDP15428 266 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 HK1P19367 917 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 UQCRC2P22695 453 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 IL12AP29459 219 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 ZFP36L2P47974 494 aaKnown RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 LHX2P50458 406 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 RPS26P62854 115 aaKnown RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 RELBQ01201 579 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 LRRC74AQ0VAA2 488 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 RCAN2Q14206 197 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 RAET1LQ5VY80 246 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 NSUN5P2Q63ZY6 315 aa10.45□□□□□ -0.74
SLIRP-205ENST00000556310 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-205ENST00000556310 EPGNQ6UW88 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms