RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OR13J1Q8NGT2 312 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MAELQ96JY0 434 aaKnown RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM181Q9P2C4 612 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 RHCGQ9UBD6 479 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 hCG_1809904A0A1W2PP81 198 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 A0A1W2PPE2 198 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 A0A1W2PR64 198 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 A0A1W2PRV1 198 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 G3V2L1 256 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TSPAN4O14817 238 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SURF4O15260 269 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SCAF4O95104 1147 aaKnown RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 AOAHP28039 575 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 GGT5P36269 586 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 DLSTP36957 453 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 NAA10P41227 235 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 POU3F4P49335 361 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 THBS3P49746 956 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 JAG1P78504 1218 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SIX1Q15475 284 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 CLLU1OSQ5K130 101 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 AKR1C8PQ5T2L2 129 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 OR52B6Q8NGF0 335 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 RHBDD1Q8TEB9 315 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ASB11Q8WXH4 323 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SULT4A1Q9BR01 284 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 DHRS4Q9BTZ2 278 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SLCO5A1Q9H2Y9 848 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 KCNIP2Q9NS61 270 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SERPINE2P07093 398 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 GKP32189 559 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 GMPRP36959 345 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 DCTP40126 519 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 VASPP50552 380 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 C1orf61Q13536 156 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 RBM39Q14498 530 aaKnown RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TBRG1Q3YBR2 411 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 EEF1A1P5Q5VTE0 462 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SLX4IPQ5VYV7 408 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 LINC00299Q6ZSB3 139 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SLC35F3Q8IY50 421 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ELMOD2Q8IZ81 293 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 OR11L1Q8NGX0 322 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MUL1Q969V5 352 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MAP3K3Q99759 626 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TXLNGYQ9BZA5 131 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 KLF15Q9UIH9 416 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 AKAIN1P0CW23 69 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 IL1RNP18510 177 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 OTX2P32243 289 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 P2RY2P41231 377 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TAS2R46P59540 309 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 RPL23AP62750 156 aaKnown RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF92Q03936 586 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 COL9A3Q14050 684 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 NPWQ8N729 165 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MDGA1Q8NFP4 955 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TSACCQ96A04 125 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 LRFN5Q96NI6 719 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 IL17FQ96PD4 163 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 RTP3Q9BQQ7 232 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SOCS7O14512 581 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 RDH16O75452 317 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 IL1AP01583 271 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 STSP08842 583 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FASLGP48023 281 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TBCEQ15813 527 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 DCST2Q5T1A1 773 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FIGNL1Q6PIW4 674 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FAM198BQ6UWH4 519 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CBLL1Q75N03 491 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TECPR1Q7Z6L1 1165 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 KIF18BQ86Y91 864 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ANKRD13BQ86YJ7 626 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 METTL4Q8N3J2 472 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FAM160A2Q8N612 972 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR5D16Q8NGK9 328 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 C17orf50Q8WW18 174 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NICN1Q9BSH3 213 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NMNAT1Q9HAN9 279 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 POLE4Q9NR33 117 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CACFD1Q9UGQ2 172 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 B4DXG7 233 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 HCRTO43612 131 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM127O75204 238 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC43A1O75387 559 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 GABBR2O75899 941 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 LCATP04180 440 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 HOXC8P31273 242 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 UQCRC1P31930 480 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NR0B1P51843 470 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 EFNA3P52797 238 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FOXRED2Q8IWF2 684 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR56B2PQ8NGI1 322 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms