RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 KCNJ5P48544 419 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 SOX8P57073 446 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 FBXW4P57775 412 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 MAPK14Q16539 360 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 NTRK2Q16620 822 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 DUSP7Q16829 419 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 ZNF791Q3KP31 576 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-208ENST00000555905 IFI44LQ53G44 452 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 TBCELQ5QJ74 424 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 AGAP7PQ5VUJ5 663 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 B3GNTL1Q67FW5 361 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-208ENST00000555905 AAGABQ6PD74 315 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 LYPD8Q6UX82 237 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 ERMP1Q7Z2K6 904 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 VTCN1Q7Z7D3 282 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 VRK2Q86Y07 508 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 GPALPP1Q8IXQ4 340 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 CMIPQ8IY22 773 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 ADGRG5Q8IZF4 528 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 FAM86B1Q8N7N1 296 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 OR4C3Q8NH37 302 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 PYDC1Q8WXC3 89 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
TMEM260-208ENST00000555905 TTC9Q92623 222 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 DUS3LQ96G46 650 aaKnown RBP10.14□□□□□ -0.79
TMEM260-208ENST00000555905 AGAP4Q96P64 663 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 TBL1XR1Q9BZK7 514 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 CCM2LQ9NUG4 571 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-208ENST00000555905 HPF1Q9NWY4 346 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 GPR83Q9NYM4 423 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 STMN3Q9NZ72 180 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 KCNE5Q9UJ90 142 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 ABCG2Q9UNQ0 655 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 SLC9A8Q9Y2E8 581 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 DTNAQ9Y4J8 743 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 AP4S1Q9Y587 144 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 FREM2Q5SZK8 3169 aa10.14□□□□□ -0.79
TMEM260-208ENST00000555905 CENPVL1A0A0U1RR11 272 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 SERINC4A6NH21 518 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 CDK2AP1O14519 115 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 TPST1O60507 370 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 ZNF354AO60765 605 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 OXSR1O95747 527 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 EVI2BP34910 448 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 CCL11P51671 97 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 UCNP55089 124 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 EEF1A1P68104 462 aaKnown RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 KCNJ10P78508 379 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 KCNC4Q03721 635 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 FGFBP1Q14512 234 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 KLHL26Q53HC5 615 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 SWT1Q5T5J6 900 aaKnown RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 MRPL2Q5T653 305 aaKnown RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 RNF220Q5VTB9 566 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 IL20RBQ6UXL0 311 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 ZNF836Q6ZNA1 936 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 APLFQ8IW19 511 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-208ENST00000555905 BEST3Q8N1M1 668 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 GPR32P1Q8NGA4 272 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 OR10G3Q8NGC4 313 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 HGDQ93099 445 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 SGCZQ96LD1 299 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 METTL7AQ9H8H3 244 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 EVA1AQ9H8M9 152 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 S100A14Q9HCY8 104 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 FLRT3Q9NZU0 649 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 SLC35A3Q9Y2D2 325 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 RAXQ9Y2V3 346 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 CPAMD8Q8IZJ3 1885 aa10.13□□□□□ -0.79
TMEM260-208ENST00000555905 CEP295Q9C0D2 2601 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 A0A1W2PQD3 144 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 CDHR4A6H8M9 788 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 PRAMEF25A6NGN4 478 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 TMEM229AB2RXF0 380 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 ALG1L2C9J202 215 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 GTPBP1O00178 669 aaKnown RBP10.12□□□□□ -0.79
TMEM260-208ENST00000555905 HNRNPRO43390 633 aaKnown RBP10.12□□□□□ -0.79
TMEM260-208ENST00000555905 NDUFB5O43674 189 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 FADS1O60427 444 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 DNAJB5O75953 348 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 KRT36O76013 467 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 LGI1O95970 557 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 CSTAP01040 98 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 CAPNS1P04632 268 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 IFNW1P05000 195 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 FABP3P05413 133 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 FCGR1AP12314 374 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 ITGA2P17301 1181 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 ADH7P40394 386 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 OR1E2P47887 323 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 CYB561P49447 251 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 HLCSP50747 726 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
TMEM260-208ENST00000555905 TMPRSS3P57727 454 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 OC90Q02509 493 aaPredicted RBP10.12□□□□□ -0.79
TMEM260-208ENST00000555905 TLE3Q04726 772 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 RAPSNQ13702 412 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 GLIPR1L2Q4G1C9 344 aa10.12□□□□□ -0.79
TMEM260-208ENST00000555905 DESI1Q6ICB0 168 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms