RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 POGLUT1Q8NBL1 392 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 FAM156AQ8NDB6 213 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 PSD4Q8NDX1 1056 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 MDS2Q8NDY4 140 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 OR52P1PQ8NH57 321 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 GRHL3Q8TE85 626 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 FIG4Q92562 907 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 NTNG2Q96CW9 530 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 CLPTM1LQ96KA5 538 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 C5orf34Q96MH7 638 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 RNF145Q96MT1 663 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 TBL1XR1Q9BZK7 514 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 METTL7AQ9H8H3 244 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 EGFL7Q9UHF1 273 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 KCNE5Q9UJ90 142 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 LAMA5O15230 3695 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 CFAP47Q6ZTR5 3102 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SERINC4A6NH21 518 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 ACOT8O14734 319 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 NDUFB5O43674 189 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 DPM1O60762 260 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PDE5AO76074 875 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 C8BP07358 591 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PABPC4LP0CB38 370 aaKnown RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 NID1P14543 1247 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 AQP1P29972 269 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PRKAR1BP31321 381 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 C17orf67Q0P5P2 114 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 MAPK14Q16539 360 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 ST3GAL2Q16842 350 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 COL28A1Q2UY09 1125 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 ZNF311Q5JNZ3 666 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PDZK1Q5T2W1 519 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 DESI1Q6ICB0 168 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 DHRS4L2Q6PKH6 230 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 C19orf48Q6RUI8 117 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 EIF3MQ7L2H7 374 aaKnown RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 DHFR2Q86XF0 187 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 TMEM178AQ8NBL3 297 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 C9orf43Q8TAL5 461 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SLC26A7Q8TE54 656 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 WBP1Q96G27 269 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SCMH1Q96GD3 660 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 NSMCE2Q96MF7 247 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 FRMD6Q96NE9 622 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 PCDHAC1Q9H158 963 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 EVA1AQ9H8M9 152 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 ADPRHL2Q9NX46 363 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 KLRF1Q9NZS2 232 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 FLRT3Q9NZU0 649 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SEC14L3Q9UDX4 400 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SLC7A8Q9UHI5 535 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-221ENST00000555773 DOCK10Q96BY6 2186 aa11.42□□□□□ -0.58
SHMT2-221ENST00000555773 NPIPA5A0A0B4J1W7 369 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 CFAP73A6NFT4 308 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 NPIPA7E9PJI5 369 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 KLRC4-KLRK1H3BQV0 150 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 GTPBP1O00178 669 aaKnown RBP11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ARPC2O15144 300 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 NME2P1O60361 137 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 EIF4E2O60573 245 aaKnown RBP11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ANGPTL1O95841 491 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 F10P00742 488 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 NPIPA8P0DM63 369 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 CCL3P10147 92 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 NCK1P16333 377 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 NME2P22392 152 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 MSX1P28360 303 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 PTGDSP41222 190 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 KCNJ5P48544 419 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ST13P50502 369 aaKnown RBP11.41□□□□□ -0.58
SHMT2-221ENST00000555773 GAS1P54826 345 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 SELENOWP63302 87 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 MS4A2Q01362 244 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 FGFBP1Q14512 234 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 EIPR1Q53HC9 387 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ZNF766Q5HY98 468 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 MTX3Q5HYI7 312 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 RNF220Q5VTB9 566 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 APOOLQ6UXV4 268 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 Q6ZS92 163 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ASB18Q6ZVZ8 466 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 MARCH3Q86UD3 253 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 GRAMD2AQ8IUY3 354 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 ZNF614Q8N883 585 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 CATSPER1Q8NEC5 780 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 WDR60Q8WVS4 1066 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 LZICQ8WZA0 190 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 SLC35B4Q969S0 331 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 FAM162AQ96A26 154 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 TAMM41Q96BW9 452 aa11.41□□□□□ -0.58
SHMT2-221ENST00000555773 CRELD1Q96HD1 420 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms