RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 PRR5P85299 388 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SLC9A5Q14940 896 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SF1Q15637 639 aaKnown RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 MPEG1Q2M385 716 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ADPRMQ3LIE5 342 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 COX20Q5RI15 118 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 OR4C11Q6IEV9 310 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 GALNT10Q86SR1 603 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SLC44A2Q8IWA5 706 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ANKRD53Q8N9V6 530 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF740Q8NDX6 193 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SUN3Q8TAQ9 357 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CNIH3Q8TBE1 160 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 FAM81AQ8TBF8 368 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 MAL2Q969L2 176 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 TM4SF18Q96CE8 201 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 BBS4Q96RK4 519 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SLX1AQ9BQ83 275 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 WDR77Q9BQA1 342 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 FUNDC2Q9BWH2 189 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 BTBD2Q9BX70 525 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 DGCR6LQ9BY27 220 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SLC7A5P2Q9GIP4 190 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CXorf36Q9H7Y0 433 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 HMG20AQ9NP66 347 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 PRDM9Q9NQV7 894 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 TBCCD1Q9NVR7 557 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 IRAK4Q9NWZ3 460 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ETAA1Q9NY74 926 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SPHK1Q9NYA1 384 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 MGAT4BQ9UQ53 548 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SNX8Q9Y5X2 465 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 AKAP6Q13023 2319 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SCN2AQ99250 2005 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 A0A0J9YY10 115 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 EFCAB10A6NFE3 127 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 URADA6NGE7 173 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 ASNA1O43681 348 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 CNOT3O75175 753 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 DIRAS1O95057 198 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 AGR2O95994 175 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 OPN1SWP03999 348 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 GBAP04062 536 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 BCHEP06276 602 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 AGXTP21549 392 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 FMO3P31513 532 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 RPS15AP62244 130 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 RPP38P78345 283 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 RGS1Q08116 209 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 PPP1R8Q12972 351 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 NPTX1Q15818 432 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 DGUOKQ16854 277 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 TIMM50Q3ZCQ8 353 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 UBE2UQ5VVX9 321 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 PPP1R32Q7Z5V6 425 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 C19orf47Q8N9M1 422 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 LMNTD1Q8N9Z9 388 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 CLEC1AQ8NC01 280 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 OR2L5Q8NG80 312 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 OR8K5Q8NH50 307 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 OR5AK3PQ8NH89 298 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 RELTQ969Z4 430 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 GAL3ST3Q96A11 431 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 CCDC120Q96HB5 630 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 F2RL3Q96RI0 385 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 PRRG3Q9BZD7 231 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 GPATCH2Q9NW75 528 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 P4HTMQ9NXG6 502 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 CNOT2Q9NZN8 540 aaKnown RBP10.31□□□□□ -0.76
SHMT2-216ENST00000554975 SEC14L3Q9UDX4 400 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 PHF11Q9UIL8 331 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 GTF3C1Q12789 2109 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 SCN3AQ9NY46 2000 aa10.31□□□□□ -0.76
SHMT2-216ENST00000554975 SH3PXD2BA1X283 911 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 CLDN24A6NM45 220 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 PTGES3LE9PB15 166 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 H7BY64 318 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 M0R3G1 203 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 XPNPEP2O43895 674 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 UGT2B17O75795 530 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 MT-ND2P03891 347 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 FHP07954 510 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 PIPP12273 146 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF12P17014 697 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 CD247P20963 164 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 CBLP22681 906 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 PSMB9P28065 219 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 LIMS1P48059 325 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 CCT3P49368 545 aaKnown RBP10.3□□□□□ -0.76
SHMT2-216ENST00000554975 TDGF1P3P51864 188 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 HSPB3Q12988 150 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 TP53BP2Q13625 1128 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF846Q147U1 533 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 KIR2DS3Q14952 304 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 CDSNQ15517 529 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 ZIC1Q15915 447 aa10.3□□□□□ -0.76
SHMT2-216ENST00000554975 EXOC3L2Q2M3D2 409 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms