RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MTX2O75431 263 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 NFATC1O95644 943 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 CD8BP10966 210 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 PRF1P14222 555 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SPI1P17947 270 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 MST1P26927 711 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SERPINA4P29622 427 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 MAPK8P45983 427 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 VEGFCP49767 419 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 DOC2AQ14183 400 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 INSL4Q14641 139 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 COX20Q5RI15 118 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 DHRS7BQ6IAN0 325 aaPredicted RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 OR5M10Q6IEU7 315 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 NR2C2APQ86WQ0 139 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 PUSL1Q8N0Z8 303 aaKnown RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 MNTQ99583 582 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 IFT27Q9BW83 186 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 HMX1Q9NP08 348 aaPredicted RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 GPATCH2Q9NW75 528 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 TRBV4-1A0A0J9YWV2 114 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 A0A1B0GUH1 482 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 E7EQ34 232 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 BNIP3LO60238 219 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OR2A4O95047 310 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 RECKO95980 971 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 HIST1H2ABP04908 130 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 URODP06132 367 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ACP2P11117 423 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 PRKAR2AP13861 404 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 SYN1P17600 705 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 IDSP22304 550 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 MTNR1BP49286 362 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF852Q6ZMS4 543 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 HIST3H2AQ7L7L0 130 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 TMEM150AQ86TG1 271 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 STX12Q86Y82 276 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OR10K1Q8NGX5 313 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OR14A16Q8NHC5 309 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 GNPDA2Q8TDQ7 276 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 KAT2AQ92830 837 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 HIST1H2ACQ93077 130 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OR2A7Q96R45 310 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 STARD7Q9NQZ5 370 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CA10Q9NS85 328 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ASB6Q9NWX5 421 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 KCND3Q9UK17 655 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 RPH3AQ9Y2J0 694 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 GPR31O00270 319 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 GATBO75879 557 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 IGSF6O95976 241 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CRYBA1P05813 215 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ANXA4P09525 319 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ANKRD34CP0C6C1 535 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CPN1P15169 458 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 PTGFRP43088 359 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CRATP43155 626 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 PRKCZQ05513 592 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 DYRK1AQ13627 763 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 SCARB2Q14108 478 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF425Q6IV72 752 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 SLC30A6Q6NXT4 461 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ZC3H14Q6PJT7 736 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 LRRN1Q6UXK5 716 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 RBMS3Q6XE24 437 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CBLN2Q8IUK8 224 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 NPAS3Q8IXF0 933 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 SPAG16Q8N0X2 631 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OXR1Q8N573 874 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF485Q8NCK3 441 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ORAI1Q96D31 301 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 BTBD1Q9H0C5 482 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 POLR2J3Q9H1A7 115 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CD84Q9UIB8 345 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 SLC16A5O15375 505 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 EFCAB14O75071 495 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 LIMS3P0CW19 117 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 LIMS4P0CW20 117 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ETFAP13804 333 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 HSD3B1P14060 373 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ATP1B2P14415 290 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ELNP15502 786 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CELP19835 753 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 MMP15P51511 669 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 MVDP53602 400 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 PSMA6P60900 246 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 RNASE12Q5GAN4 147 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 LRRC73Q5JTD7 316 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 THOC6Q86W42 341 aaKnown RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 ARL14EPQ8N8R7 260 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-203ENST00000554873 OR2AP1Q8NGE2 309 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 RNFT2Q96EX2 444 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 LRFN2Q9ULH4 789 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
SYNE3-203ENST00000554873 CARNS1A5YM72 827 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CDC123O75794 336 aaPredicted RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 POP7O75817 140 aaKnown RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 EGFP01133 1207 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 WNT1P04628 370 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 IFNW1P05000 195 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms