RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.39□□□□□ -1.23
LINC01397-201ENST00000554808 CNOT11Q9UKZ1 510 aaKnown RBP7.39□□□□□ -1.23
LINC01397-201ENST00000554808 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
LINC01397-201ENST00000554808 PRRC2CQ9Y520 2896 aaKnown RBP7.39□□□□□ -1.23
LINC01397-201ENST00000554808 TLN1Q9Y490 2541 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 ELOVL7A1L3X0 281 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 NPIPB9F8W1W9 429 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 NDUFB5O43674 189 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 PEX1O43933 1283 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 FADS1O60427 444 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 PGM3O95394 542 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 STAMBPO95630 424 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 TFPTP0C1Z6 253 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CCL3P10147 92 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 HSD17B1P14061 328 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 NID1P14543 1247 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CD1EP15812 388 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 IL7RP16871 459 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 RPS4Y1P22090 263 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 HTR1EP28566 365 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CPA2P48052 419 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 MASP1P48740 699 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SLC7A2P52569 658 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CASP9P55211 416 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 FUT5Q11128 374 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 BNIP1Q12981 228 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 BNIP2Q12982 314 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 FGFBP1Q14512 234 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GPR68Q15743 365 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 HYAL4Q2M3T9 481 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GRAMD1BQ3KR37 738 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 RABL3Q5HYI8 236 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CCNJQ5T5M9 372 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 RNF220Q5VTB9 566 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SPINK14Q6IE38 97 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 TYW3Q6IPR3 259 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 FAM180AQ6UWF9 173 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CCDC121Q6ZUS5 278 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 CCDC80Q76M96 950 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 EIF3MQ7L2H7 374 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GALNTL5Q7Z4T8 443 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 ZNF227Q86WZ6 799 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GRAMD2AQ8IUY3 354 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SLC15A3Q8IY34 581 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 ZNF440Q8IYI8 595 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 MICU2Q8IYU8 434 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 DEFB107AQ8IZN7 70 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 EXD3Q8N9H8 876 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 ZFP62Q8NB50 900 aaPredicted RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 OR2M7Q8NG81 312 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 OR5M3Q8NGP4 307 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 OR1J4Q8NGS1 313 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GRHL3Q8TE85 626 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 WDR60Q8WVS4 1066 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 NTNG2Q96CW9 530 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 OTUB1Q96FW1 271 aaPredicted RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 TMEM19Q96HH6 336 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 RNF145Q96MT1 663 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 KCTD14Q9BQ13 255 aaPredicted RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 TREX2Q9BQ50 279 aaPredicted RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SLC39A3Q9BRY0 314 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 IKZF5Q9H5V7 419 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 EXOSC3Q9NQT5 275 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 ANKRD10Q9NXR5 420 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 PLA2G3Q9NZ20 509 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 PPP4R1LQ9P1A2 415 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 TMEM181Q9P2C4 612 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 MKLN1Q9UL63 735 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 DTNAQ9Y4J8 743 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 GPC6Q9Y625 555 aaPredicted RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 KCNE3Q9Y6H6 103 aa7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 SPENQ96T58 3664 aaKnown RBP7.38□□□□□ -1.23
LINC01397-201ENST00000554808 HECTD1Q9ULT8 2610 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 IGLV3-32A0A0A0MS00 114 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 SERINC4A6NH21 518 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 AGAP5A6NIR3 686 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 NME4O00746 187 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 SNPHO15079 494 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 GSTA4O15217 222 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 GYG2O15488 501 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 ZNF264O43296 627 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 EIF4E2O60573 245 aaKnown RBP7.37□□□□□ -1.23
LINC01397-201ENST00000554808 TRIM3O75382 744 aaPredicted RBP7.37□□□□□ -1.23
LINC01397-201ENST00000554808 NME6O75414 186 aaPredicted RBP7.37□□□□□ -1.23
LINC01397-201ENST00000554808 UGT2B17O75795 530 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 CBR3O75828 277 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 SORBS2O94875 1100 aaKnown RBP7.37□□□□□ -1.23
LINC01397-201ENST00000554808 ANGPTL1O95841 491 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 IGKV1D-16P01601 117 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 PDGFAP04085 211 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 C8BP07358 591 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 CHRM4P08173 479 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 T-ENOLP0DO92 83 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 UBL4AP11441 157 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 UQCRBP14927 111 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 HOXB6P17509 224 aaKnown RBP7.37□□□□□ -1.23
LINC01397-201ENST00000554808 PRKAR1BP31321 381 aa7.37□□□□□ -1.23
LINC01397-201ENST00000554808 GCKP35557 465 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms