RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TOP1P11387 765 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 AREGP15514 252 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CD1DP15813 335 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SELEP16581 610 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 STMN1P16949 149 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF18P17022 549 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GPX3P22352 226 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GLRA1P23415 457 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FCARP24071 287 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FCGR2BP31994 310 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FCGR2CP31995 323 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RDXP35241 583 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NSFP46459 744 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RPS9P46781 194 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NUMBP49757 651 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NT5C2P49902 561 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FKBP3Q00688 224 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ELAVL2Q12926 359 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 DNAJC3Q13217 504 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TSTA3Q13630 321 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MEF2DQ14814 521 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 HEPACAMQ14CZ8 416 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 KRT31Q15323 416 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR1C1Q15619 314 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 IGFBP7Q16270 282 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PSMD5Q16401 504 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 UPP1Q16831 310 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CT45A2Q5DJT8 189 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PLBD1Q6P4A8 553 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 DOK6Q6PKX4 331 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 KDM7AQ6ZMT4 941 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF730Q6ZMV8 503 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CATSPER4Q7RTX7 472 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RABEPKQ7Z6M1 372 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF589Q86UQ0 364 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NAXDQ8IW45 347 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ARL10Q8N8L6 244 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TSTD1Q8NFU3 115 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR6F1Q8NGZ6 308 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR4L1Q8NH43 312 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR4A16Q8NH70 328 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GOLGA5Q8TBA6 731 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 LRRC15Q8TF66 581 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TCP11Q8WWU5 503 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GLYATL1Q969I3 302 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CLDN23Q96B33 292 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PCED1BQ96HM7 432 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SLC45A3Q96JT2 553 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CXorf58Q96LI9 332 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PKP2Q99959 881 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 API5Q9BZZ5 524 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM15Q9C019 465 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM6Q9C030 488 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CXCL16Q9H2A7 254 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GANQ9H2C0 597 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM245Q9H330 911 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NXF3Q9H4D5 531 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 THAP9Q9H5L6 903 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 DCLRE1BQ9H816 532 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NMUR1Q9HB89 426 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 KCNMB3Q9NPA1 279 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 DDX28Q9NUL7 540 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ACOXLQ9NUZ1 547 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ANKMY1Q9P2S6 941 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 THAP10Q9P2Z0 257 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 UBQLN2Q9UHD9 624 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TRMT6Q9UJA5 497 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MOSPD1Q9UJG1 213 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MRTO4Q9UKD2 239 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MRPL11Q9Y3B7 192 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TEX264Q9Y6I9 313 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TACC2O95359 2948 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PCDH15Q96QU1 1955 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 WDR19Q8NEZ3 1342 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MDC1Q14676 2089 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 HIVEP3Q5T1R4 2406 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ESPL1Q14674 2120 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PLXNA2O75051 1894 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 NBEAL1Q6ZS30 2694 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 DENND4CQ5VZ89 1909 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TNRC6AQ8NDV7 1962 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 LRRK1Q38SD2 2015 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ANKHD1Q8IWZ3 2542 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 IGKV3D-20A0A0C4DH25 116 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TRBV2A0A0J9YWF9 115 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 MACROD2A1Z1Q3 448 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 BCLAF3A2AJT9 711 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ARHGEF33A8MVX0 844 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TMCO5BA8MYB1 307 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 E9PQ18 207 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TLR4O00206 839 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RRP8O43159 456 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 KIAA0513O60268 411 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CSO75390 466 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ERLIN2O94905 339 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 POP4O95707 220 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TPBGLP0DKB5 382 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ADORA3P0DMS8 318 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CALM1P0DP23 149 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CALM2P0DP24 149 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms