RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FRAT1Q92837 279 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 NAP1L5Q96NT1 182 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 SSX3Q99909 188 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 ST6GALNAC5Q9BVH7 336 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TSPYL1Q9H0U9 437 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 ATG10Q9H0Y0 220 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TRPV6Q9H1D0 765 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TMEM245Q9H330 911 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 AATFQ9NY61 560 aaKnown RBP eCLIP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TAS2R16Q9NYV7 291 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TAS2R3Q9NYW6 316 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 NINJ2Q9NZG7 142 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 RAI14Q9P0K7 980 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 TRIM10Q9UDY6 481 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 ERVK-19Q9WJR5 959 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 USP16Q9Y5T5 823 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 HTTP42858 3142 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 MRC1P22897 1456 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 SCN7AQ01118 1682 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 ABCC12Q96J65 1359 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 MACROD2A1Z1Q3 448 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 RGSL1A5PLK6 1076 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 C5orf51A6NDU8 294 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 TRABD2BA6NFA1 517 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PSMD3O43242 534 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SCGB2A1O75556 95 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PROS1P07225 676 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 RALAP11233 206 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CD1EP15812 388 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CCNA2P20248 432 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CCND2P30279 289 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 OR1D2P34982 312 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CD86P42081 329 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 RABIFP47224 123 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 P2RY4P51582 365 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 GPC3P51654 580 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 TKTL1P51854 596 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 GEMP55040 296 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SLC26A5P58743 744 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CCZ1BP86790 482 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CCZ1P86791 482 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 NME3Q13232 169 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PDE7AQ13946 482 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SPHARQ15513 63 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 TRADDQ15628 312 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 QRICH1Q2TAL8 776 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PAN3Q58A45 887 aaKnown RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 ACER2Q5QJU3 275 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CELF3Q5SZQ8 465 aaKnown RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 DCAF12Q5T6F0 453 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 C12orf60Q5U649 245 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 OR6B2Q6IFH4 312 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF544Q6NX49 715 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 IGFL2Q6UWQ7 119 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SIGLEC15Q6ZMC9 328 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 WDR88Q6ZMY6 472 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 Q6ZRG5 221 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 ASPGQ86U10 573 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 TTC5Q8N0Z6 440 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 OR4F5Q8NH21 305 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 FBXO25Q8TCJ0 367 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 HAS2Q92819 552 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PNPLA2Q96AD5 504 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 DCPSQ96C86 337 aaKnown RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 DTD2Q96FN9 168 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 VPS39Q96JC1 886 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SPATA13Q96N96 652 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CASD1Q96PB1 797 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 MYCBPQ99417 103 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 HSD3B7Q9H2F3 369 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 TSPY26PQ9H489 355 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 RIBC2Q9H4K1 309 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 IKZF5Q9H5V7 419 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 DCLRE1BQ9H816 532 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 Q9HAA7 133 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 NGBQ9NPG2 151 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 PLSCR3Q9NRY6 295 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 SPASTQ9UBP0 616 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 COPS7AQ9UBW8 275 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 FAM153AQ9UHL3 310 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 KLHL21Q9UJP4 597 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 BLOC1S6Q9UL45 172 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 FOXA2Q9Y261 457 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-210ENST00000553693 ATP6V0A2Q9Y487 856 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 IKBKGQ9Y6K9 419 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 CLCA3PQ9Y6N3 262 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 KIAA1217Q5T5P2 1943 aa2.63□□□□□ -1.99
SCFD1-210ENST00000553693 UBR2Q8IWV8 1755 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 PAPPA2Q9BXP8 1791 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 CENPFP49454 3210 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 SLC15A5A6NIM6 579 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TLR4O00206 839 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 SLC28A1O00337 649 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 CHEK1O14757 476 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 NME6O75414 186 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 NUDT14O95848 222 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ACTL6AO96019 429 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 GOT2P00505 430 aaKnown RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TGFAP01135 160 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms