RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ATP6V0A1Q93050 837 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 FAM104AQ969W3 186 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 HAVCR1Q96D42 359 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 ATP6V0BQ99437 205 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 SLC25A39Q9BZJ4 359 aaPredicted RBP2.09□□□□□ -2.07
VRK1-202ENST00000553683 COMMD4Q9H0A8 199 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 PTGES2Q9H7Z7 377 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 YY1AP1Q9H869 796 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 COG4Q9H9E3 785 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 TRPV5Q9NQA5 729 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 NDUFA13Q9P0J0 144 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 OR1A1Q9P1Q5 309 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 WDR45Q9Y484 360 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 H3BMH7 237 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 DDX39AO00148 427 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 EFNA2O43921 213 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ZNF254O75437 659 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 SCRG1O75711 98 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 TIMP1P01033 207 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 THRBP10828 461 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 IGLL1P15814 213 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 CCNE1P24864 410 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 SSR1P43307 286 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 RPL29P47914 159 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 CD151P48509 253 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 DHPSP49366 369 aaPredicted RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 VLDLRP98155 873 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 PLOD1Q02809 727 aaPredicted RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 KARSQ15046 597 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 AANATQ16613 207 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 PVRIGQ6DKI7 326 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 PNCKQ6P2M8 343 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 IL34Q6ZMJ4 242 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 LRRC70Q7Z2Q7 622 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ZSCAN30Q86W11 494 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ANKRD20A12PQ8NF67 263 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 OR9A4Q8NGU2 314 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 URGCPQ8TCY9 931 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ARNTL2Q8WYA1 636 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ITFG2Q969R8 447 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 MARC2Q969Z3 335 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 TMEM186Q96B77 213 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 PINX1Q96BK5 328 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 ELMO2Q96JJ3 720 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 PLEKHF1Q96S99 279 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 SLC30A2Q9BRI3 323 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ALDH8A1Q9H2A2 487 aaPredicted RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 ZDHHC11Q9H8X9 412 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 MTRRQ9UBK8 725 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 SPAG9O60271 1321 aaKnown RBP2.08□□□□□ -2.08
VRK1-202ENST00000553683 LTBP1Q14766 1721 aa2.08□□□□□ -2.08
VRK1-202ENST00000553683 ARHGAP21Q5T5U3 1957 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 CC2D2AQ9P2K1 1620 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 IGHV1OR15-1A0A075B7D0 117 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 A0A1B0GUA9 196 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 ARHGAP42A6NI28 874 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 SSX5O60225 188 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 HMOX1P09601 288 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 PSG2P11465 335 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 AHCYP23526 432 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 DPP4P27487 766 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 ADORA2BP29275 332 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 NMT1P30419 496 aaKnown RBP2.07□□□□□ -2.08
VRK1-202ENST00000553683 NTSP30990 170 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 STARP49675 285 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 TIMM10P62072 90 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 TLE4Q04727 773 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 IFT88Q13099 833 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 PDIA5Q14554 519 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 HERPUD1Q15011 391 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 CDKN3Q16667 212 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 FAM120AOSQ5T036 256 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 SLX4IPQ5VYV7 408 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 IRGCQ6NXR0 463 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 H1FOOQ8IZA3 346 aaPredicted RBP2.07□□□□□ -2.08
VRK1-202ENST00000553683 CCNYQ8ND76 341 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 OR2AP1Q8NGE2 309 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 FBXO30Q8TB52 745 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 C7orf33Q8WU49 177 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 DNAJA4Q8WW22 397 aaPredicted RBP2.07□□□□□ -2.08
VRK1-202ENST00000553683 PSMG2Q969U7 264 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 NRTNQ99748 197 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 TBC1D10AQ9BXI6 508 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 OR51J1Q9H342 316 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 PPDPFQ9H3Y8 114 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 GLIPR2Q9H4G4 154 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 KAT8Q9H7Z6 458 aaKnown RBP2.07□□□□□ -2.08
VRK1-202ENST00000553683 LPAR2Q9HBW0 351 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 CD274Q9NZQ7 290 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 IL19Q9UHD0 177 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 CYTH4Q9UIA0 394 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 RNF6Q9Y252 685 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 STRAPQ9Y3F4 350 aaKnown RBP2.07□□□□□ -2.08
VRK1-202ENST00000553683 CCDC7Q96M83 1385 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 PLEKHG1Q9ULL1 1385 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 RLFQ13129 1914 aa2.07□□□□□ -2.08
VRK1-202ENST00000553683 SMIM28A0A1B0GU29 152 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 SAGE2PA6NJ88 616 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 WASHC1A8K0Z3 465 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 VGLL3A8MV65 326 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms