RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TIMP1P01033 207 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 IGHV3-13P01766 116 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 UCP1P25874 307 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 PPP2R1BP30154 601 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 SAA4P35542 130 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 HERVK_113P63132 956 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 ERVK-8P63133 956 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 GSTO1P78417 241 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 CD226Q15762 336 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 PARP6Q2NL67 630 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 HSP90AB3PQ58FF7 597 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 VWA2Q5GFL6 755 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 MFSD14CQ5VZR4 134 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 REP15Q6BDI9 236 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 BCORP1Q8N888 145 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 OR52B4Q8NGK2 314 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 FLVCR1-AS1Q8TAF5 88 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 FCGR1BQ92637 280 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 BIRC7Q96CA5 298 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 ERVK-6Q9BXR3 956 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 TRIM6Q9C030 488 aaPredicted RBP3.9□□□□□ -1.79
LIMA1-205ENST00000550592 TAS2R16Q9NYV7 291 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 PAK5Q9P286 719 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 MBD2Q9UBB5 411 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 PURGQ9UJV8 347 aaKnown RBP3.9□□□□□ -1.79
LIMA1-205ENST00000550592 SLC9A8Q9Y2E8 581 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 KLF2Q9Y5W3 355 aaPredicted RBP3.9□□□□□ -1.79
LIMA1-205ENST00000550592 RLFQ13129 1914 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 USP9XQ93008 2570 aaPredicted RBP3.89□□□□□ -1.79
LIMA1-205ENST00000550592 RGSL1A5PLK6 1076 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 F8WDY8 70 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 K7ERI5 159 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 LGALS8O00214 317 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 PI15O43692 258 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 TOXO94900 526 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 VCPP55072 806 aaKnown RBP3.89□□□□□ -1.79
LIMA1-205ENST00000550592 KRTAP10-9P60411 292 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 PDZK1IP1Q13113 114 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 LDLRAP1Q5SW96 308 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ARMCX5Q6P1M9 558 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 RFWD3Q6PCD5 774 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF841Q6ZN19 808 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 STOX1Q6ZVD7 989 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 CATSPER4Q7RTX7 472 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ERC1Q8IUD2 1116 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 CERS5Q8N5B7 392 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 RASL10AQ92737 203 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 TSPAN18Q96SJ8 248 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 PSMB7Q99436 277 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 TTYH2Q9BSA4 534 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 RBM24Q9BX46 236 aaKnown RBP3.89□□□□□ -1.79
LIMA1-205ENST00000550592 CCSER1Q9C0I3 900 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ADNPQ9H2P0 1102 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 POLE3Q9NRF9 147 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ATXN10Q9UBB4 475 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 P2RX2Q9UBL9 471 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 MLXQ9UH92 298 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF292O60281 2723 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 ATP8B3O60423 1300 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 MED23Q9ULK4 1368 aa3.89□□□□□ -1.79
LIMA1-205ENST00000550592 AK9Q5TCS8 1911 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 A0A1B0GU03 582 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 FOXI3A8MTJ6 420 aaPredicted RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 E2F3O00716 465 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 PDXKO00764 312 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 RANBP6O60518 1105 aaKnown RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 APBB3O95704 486 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 GOT2P00505 430 aaKnown RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 MT-ND1P03886 318 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 HOXD4P09016 255 aaPredicted RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 SLC7A2P52569 658 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 RAG2P55895 527 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 C17orf58Q2M2W7 97 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 TMEM44Q2T9K0 475 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 TIPARPQ7Z3E1 657 aaKnown RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 SLC47A2Q86VL8 602 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 ARFGAP2Q8N6H7 521 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 ARNTL2Q8WYA1 636 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 SLC25A36Q96CQ1 311 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 SOSTQ9BQB4 213 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 FAM173AQ9BQD7 235 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 APOOQ9BUR5 198 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 TDRD3Q9H7E2 651 aaKnown RBP3.88□□□□□ -1.79
LIMA1-205ENST00000550592 VAT1LQ9HCJ6 419 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 GPR83Q9NYM4 423 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 FZR1Q9UM11 496 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 MGAT4BQ9UQ53 548 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 FKBP7Q9Y680 259 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 PCNX3Q9H6A9 2034 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 ECM29Q5VYK3 1845 aa3.88□□□□□ -1.79
LIMA1-205ENST00000550592 ZFYVE26Q68DK2 2539 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 A0A0J9YVX5 310 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 A0A1B0GUL7 405 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 FAM230AA0A1W2PPH8 454 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 RNF222A6NCQ9 220 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ACOD1A6NK06 481 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms