RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MCTS1Q9ULC4 181 aaKnown RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PLEKHA6Q9Y2H5 1048 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PTGDR2Q9Y5Y4 395 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 MTORP42345 2549 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 NCKAP5O14513 1909 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 GXYLT2A0PJZ3 443 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 H3BML4 177 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 C16orf97H3BN30 126 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 H3BNH8 94 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PIP5K1BO14986 540 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SCAMP2O15127 329 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SEC14L5O43304 696 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SMNDC1O75940 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 HRGP04196 525 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PABPC4LP0CB38 370 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 FOSL1P15407 271 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PRPS1L1P21108 318 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ATP6V1C1P21283 382 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 TCEA1P23193 301 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ME2P23368 584 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 CPOXP36551 454 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 CD79BP40259 229 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF41P51814 821 aaPredicted RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SUCLG1P53597 346 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 CLDN15P56746 228 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 RAC1P63000 192 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 POU6F2P78424 691 aaPredicted RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 TP53BP2Q13625 1128 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PON3Q15166 354 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SMU1Q2TAY7 513 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 XKR7Q5GH72 579 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 WDR93Q6P2C0 686 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 APOOLQ6UXV4 268 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 EXOC3L1Q86VI1 746 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 SLC16A11Q8NCK7 471 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR56A1Q8NGH5 318 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR4C3Q8NH37 302 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PSMA8Q8TAA3 256 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PPP1R14CQ8TAE6 165 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 FIG4Q92562 907 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAM120BQ96EK7 910 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 GIMAP5Q96F15 307 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZIM3Q96PE6 472 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 TMEM109Q9BVC6 243 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PIGUQ9H490 435 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PLEKHF2Q9H8W4 249 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ANKZF1Q9H8Y5 726 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 NEUROD4Q9HD90 331 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZCCHC3Q9NUD5 404 aaKnown RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 FLRT3Q9NZU0 649 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAF1Q9UNN5 650 aaPredicted RBP9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 PROCRQ9UNN8 238 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 EMC9Q9Y3B6 208 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 ARHGAP21Q5T5U3 1957 aa9.8□□□□□ -0.84
VTI1BP3-201ENST00000550220 MPDZO75970 2070 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 UQCRHLA0A096LP55 91 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 GJE1A6NN92 205 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 B4DXG7 233 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ADAMDEC1O15204 470 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 PEX11AO75192 247 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ATE1O95260 518 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 SLU7O95391 586 aaKnown RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 SYNGR4O95473 234 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 OXSR1O95747 527 aaPredicted RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 PLGP00747 810 aaPredicted RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 IGKV1D-16P01601 117 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 CHRNGP07510 517 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 POU2F1P14859 743 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 PPP3CBP16298 524 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 IL11P20809 199 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ADH6P28332 368 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 KIR2DL2P43627 348 aaPredicted RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 KCNJ5P48544 419 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 CCT3P49368 545 aaKnown RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 DUSP5Q16690 384 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 DEFB113Q30KQ7 82 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF385BQ569K4 471 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 C6orf136Q5SQH8 315 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 IL23RQ5VWK5 629 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 CDC73Q6P1J9 531 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ESPNLQ6ZVH7 1005 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAM214BQ7L5A3 538 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 BTLAQ7Z6A9 289 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 NUDCD3Q8IVD9 361 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 FNDC5Q8NAU1 212 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR2W6PQ8NHA6 318 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 CLHC1Q8NHS4 586 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 B4GALNT2Q8NHY0 566 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 FNDC9Q8TBE3 224 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ADAMTS15Q8TE58 950 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 JADE3Q92613 823 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 CAVIN3Q969G5 261 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 COQ8BQ96D53 544 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 ACTRT3Q9BYD9 372 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 RTN4RQ9BZR6 473 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 BHLHE41Q9C0J9 482 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms