RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FBXW10Q5XX13 1052 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 SLC2A7Q6PXP3 512 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 DLEU7Q6UYE1 221 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 POU5F2Q8N7G0 328 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 OR52R1Q8NGF1 315 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 OR1J4Q8NGS1 313 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 OR9A2Q8NGT5 310 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 ELP4Q96EB1 424 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 TMEM41AQ96HV5 264 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 NODALQ96S42 347 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 INPP5KQ9BT40 448 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 PRDM14Q9GZV8 571 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 PAIP1Q9H074 479 aaKnown RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 CLEC4MQ9H2X3 399 aaPredicted RBP12.21□□□□□ -0.45
NUP188-211ENST00000550219 UBQLN3Q9H347 655 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 TAS2R9Q9NYW1 312 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 TAGLN3Q9UI15 199 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 CFL2Q9Y281 166 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 GMEB1Q9Y692 573 aa12.21□□□□□ -0.45
NUP188-211ENST00000550219 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.46
NUP188-211ENST00000550219 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.46
NUP188-211ENST00000550219 CCDC168Q8NDH2 2452 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ARHGAP21Q5T5U3 1957 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 TRBV5-3A0A0A0MS03 114 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ANGPT2O15123 496 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 PLOD3O60568 738 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ERN1O75460 977 aaKnown RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 CTAG2O75638 210 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 CBX7O95931 251 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 NPPAP01160 153 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ABCB1P08183 1280 aaPredicted RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 BMP7P18075 431 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 TCEA1P23193 301 aaKnown RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 GCKP35557 465 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ZNF136P52737 540 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 HSPB3Q12988 150 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 FLYWCH1Q4VC44 716 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 REP15Q6BDI9 236 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 C17orf47Q8NEP4 570 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 RNASE6Q93091 150 aaKnown RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 HGDQ93099 445 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ABTB1Q969K4 478 aaPredicted RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 RMND5BQ96G75 393 aaPredicted RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 LCORQ96JN0 433 aaPredicted RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 LIME1Q9H400 295 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 CXorf36Q9H7Y0 433 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 ANKRA2Q9H9E1 313 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 CCM2LQ9NUG4 571 aaPredicted RBP12.2□□□□□ -0.46
NUP188-211ENST00000550219 SLAMF8Q9P0V8 285 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 PCDHGB4Q9UN71 923 aa12.2□□□□□ -0.46
NUP188-211ENST00000550219 PRAMEF25A6NGN4 478 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 H0Y3Z8 333 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 RFXANKO14593 260 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 MRASO14807 208 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 SNPHO15079 494 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 UGT2B11O75310 529 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 NME6O75414 186 aaPredicted RBP12.19□□□□□ -0.46
NUP188-211ENST00000550219 UBOX5O94941 541 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 PSMG1O95456 288 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 CPSF4O95639 269 aaKnown RBP12.19□□□□□ -0.46
NUP188-211ENST00000550219 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
NUP188-211ENST00000550219 CDKN2CP42773 168 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 SRYQ05066 204 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 SF3B4Q15427 424 aaKnown RBP eCLIP12.19□□□□□ -0.46
NUP188-211ENST00000550219 TRMT12Q53H54 448 aaKnown RBP12.19□□□□□ -0.46
NUP188-211ENST00000550219 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 VASNQ6EMK4 673 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 HACD2Q6Y1H2 254 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 NUP54Q7Z3B4 507 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 MSRB3Q8IXL7 192 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 OR7G2Q8NG99 324 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 OR4A15Q8NGL6 344 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 OR14L1PQ8NHC6 308 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 SFXN5Q8TD22 340 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 KAT2AQ92830 837 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 RCN3Q96D15 328 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 WDYHV1Q96HA8 205 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 PANX1Q96RD7 426 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 EFCAB1Q9HAE3 211 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
NUP188-211ENST00000550219 PLEKHA6Q9Y2H5 1048 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 PCDHB14Q9Y5E9 798 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 KIAA1549Q9HCM3 1950 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 CELSR1Q9NYQ6 3014 aa12.19□□□□□ -0.46
NUP188-211ENST00000550219 A6NNC1 897 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 FXYD1O00168 92 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 UPK1AO00322 258 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 SYT5O00445 386 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 ACOX3O15254 700 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 EMC8O43402 210 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 ICOSLGO75144 302 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 REM1O75628 298 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 BCAS2O75934 225 aaPredicted RBP12.18□□□□□ -0.46
NUP188-211ENST00000550219 KCNH1O95259 989 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 CYP4B1P13584 511 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms