RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 LDB3O75112 727 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TSPAN19P0C672 248 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 IL9P15248 144 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CD36P16671 472 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 NT5EP21589 574 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 IDH2P48735 452 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 RGS8P57771 180 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 FHL1Q13642 323 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 GINS1Q14691 196 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TMEM236Q5W0B7 351 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C16orf87Q6PH81 154 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 USP43Q70EL4 1123 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 WDR53Q7Z5U6 358 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 OR4N5Q8IXE1 308 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 COX18Q8N8Q8 333 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 FAM181AQ8N9Y4 354 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 OR6Q1Q8NGQ2 317 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SH3YL1Q96HL8 342 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 OPALINQ96PE5 141 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SLC38A3Q99624 504 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 MND1Q9BWT6 205 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SLC19A3Q9BZV2 496 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 QRSL1Q9H0R6 528 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CACYBPQ9HB71 228 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 GMEB2Q9UKD1 530 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 IGLV3-12A0A075B6K2 115 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 C2orf92A0A1B0GVN3 265 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 SNTNA6NMZ2 147 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 IGKV3-11P04433 115 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 HMGN1P05114 100 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 RPLP0P05388 317 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CT45A8P0DMV1 189 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CT45A9P0DMV2 189 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 DLX5P56178 289 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 HSD11B2P80365 405 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 FOXK2Q01167 660 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 BDH1Q02338 343 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 RPL6Q02878 288 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CFHR1Q03591 330 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 OR1Q1Q15612 314 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 DGUOKQ16854 277 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 KLHL26Q53HC5 615 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CT45A2Q5DJT8 189 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 MRPL2Q5T653 305 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 NPSR1Q6W5P4 371 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 Q6ZNX1 250 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 OLIG3Q7RTU3 272 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 NLGN4XQ8N0W4 816 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 LNX2Q8N448 690 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 MFSD4AQ8N468 514 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 STX19Q8N4C7 294 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 RIT1Q92963 219 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CDX2Q99626 313 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 DPYSL5Q9BPU6 564 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PLA2G12AQ9BZM1 189 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 FOXQ1Q9C009 403 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 TRIM2Q9C040 744 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PRTFDC1Q9NRG1 225 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 RYDENQ9NUL5 291 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 NDUFB11Q9NX14 153 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 SEC14L4Q9UDX3 406 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PRODH2Q9UF12 536 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PPIEQ9UNP9 301 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CENPVL1A0A0U1RR11 272 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 BHLHE40O14503 412 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 YKT6O15498 198 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 HYAL3O43820 417 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CNOT3O75175 753 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 RAB36O95755 333 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 IGKV1D-16P01601 117 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 POU2F1P14859 743 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF12P17014 697 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 TYRP1P17643 537 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 BMXP51813 675 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 FXYD6P3P58550 94 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 UBXN2BQ14CS0 331 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 NXNL2Q5VZ03 156 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 CD200R1LQ6Q8B3 271 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PLEKHM3Q6ZWE6 761 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 PLXDC1Q8IUK5 500 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 NKAIN4Q8IVV8 208 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 OR52I1Q8NGK6 324 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 MMP27Q9H306 513 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 EQTNQ9NQ60 294 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 TBCCD1Q9NVR7 557 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 HAO2Q9NYQ3 351 aa9.24□□□□□ -0.93
RAB5B-206ENST00000549505 EXOSC1Q9Y3B2 195 aaKnown RBP9.24□□□□□ -0.93
RAB5B-206ENST00000549505 A0A075B6Q4 140 aa9.23□□□□□ -0.93
RAB5B-206ENST00000549505 METTL15A6NJ78 407 aa9.23□□□□□ -0.93
RAB5B-206ENST00000549505 BCAT2O15382 392 aaPredicted RBP9.23□□□□□ -0.93
RAB5B-206ENST00000549505 IGFBP1P08833 259 aaPredicted RBP9.23□□□□□ -0.93
RAB5B-206ENST00000549505 CPEP16870 476 aa9.23□□□□□ -0.93
RAB5B-206ENST00000549505 CD1CP29017 333 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms