RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 HIST1H1TP22492 207 aaPredicted RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 ACADLP28330 430 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 GABRA5P31644 462 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 OR12D2P58182 307 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 VSX2P58304 361 aaPredicted RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 E2F1Q01094 437 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 CDK20Q8IZL9 346 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 TOMM5Q8N4H5 51 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 AKAP1Q92667 903 aaKnown RBP eCLIP12.14□□□□□ -0.479e-8■■■■□ 24.9
BRF1-210ENST00000547374 SENP5Q96HI0 755 aaPredicted RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 BTBD1Q9H0C5 482 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 KCND3Q9UK17 655 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 ING4Q9UNL4 249 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 NDUFV2P19404 249 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 CENPAP49450 140 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 ELAVL3Q14576 367 aaKnown RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 OCLNQ16625 522 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 CLDN22Q8N7P3 220 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 FRMD1Q8N878 549 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 OR5K2Q8NHB8 316 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 FANK1Q8TC84 345 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 ORAI3Q9BRQ5 295 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 FBXO34Q9NWN3 711 aa12.14□□□□□ -0.47
BRF1-210ENST00000547374 SIRT4Q9Y6E7 314 aaPredicted RBP12.14□□□□□ -0.47
BRF1-210ENST00000547374 BRWD1Q9NSI6 2320 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CHST10O43529 356 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 DPM1O60762 260 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 GATBO75879 557 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 HRGP04196 525 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 EPHA5P54756 1037 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 GPR176Q14439 515 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SLC25A35Q3KQZ1 300 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 FBXO15Q8NCQ5 510 aaPredicted RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 OR52E1Q8NGJ3 308 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 TRMT10AQ8TBZ6 339 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SLC25A18Q9H1K4 315 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SPAG17Q6Q759 2223 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 OR2W5A6NFC9 320 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 A8MUA0 341 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 C4orf51C9J302 202 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 LRRN3E7EW58 273 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 PEX12O00623 359 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 ICMTO60725 284 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 EIF4EP06730 217 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 PVRP15151 417 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 HNRNPA1L2Q32P51 320 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 C3orf38Q5JPI3 329 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CRIPAKQ8N1N5 446 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 GATSQ8NAP1 163 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 MSANTD3Q96H12 275 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CD180Q99467 661 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 ATF6BQ99941 703 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 LRRN3Q9H3W5 708 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 FN3KQ9H479 309 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 DNAJB6O75190 326 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 ALX3O95076 343 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 RASGRP1O95267 797 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 PPP1R3DO95685 299 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 CCL5P13501 91 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 MAPK9P45984 424 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 SOX2P48431 317 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 MINDY4Q4G0A6 757 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 TRMT12Q53H54 448 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 ZNF542PQ5EBM4 170 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 QSOX2Q6ZRP7 698 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 GDF7Q7Z4P5 450 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 COX18Q8N8Q8 333 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 OSTF1Q92882 214 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 OTUB2Q96DC9 234 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 NKX3-1Q99801 234 aaPredicted RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 ARHGAP9Q9BRR9 750 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 DPEP2Q9H4A9 486 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 C20orf141Q9NUB4 165 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 ZSCAN32Q9NX65 697 aa12.13□□□□□ -0.47
BRF1-210ENST00000547374 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
BRF1-210ENST00000547374 SLC9A3R1O14745 358 aaPredicted RBP12.12□□□□□ -0.47
BRF1-210ENST00000547374 ZNF780AO75290 641 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms