RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 TMED9Q9BVK6 235 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 MTHFD2LQ9H903 347 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-209ENST00000547018 KCND3Q9UK17 655 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 PILRAQ9UKJ1 303 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
SCAF11-209ENST00000547018 BDP1A6H8Y1 2624 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 CPED1A4D0V7 1026 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 EFCAB10A6NFE3 127 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
SCAF11-209ENST00000547018 STX11O75558 287 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 GABRB1P18505 474 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 S100A5P33763 92 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 SOX18P35713 384 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 CD300CQ08708 224 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 CA13Q8N1Q1 262 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 C19orf47Q8N9M1 422 aaKnown RBP11.83□□□□□ -0.52
SCAF11-209ENST00000547018 OR13C2Q8NGS9 318 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 TMEM80Q96HE8 168 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
SCAF11-209ENST00000547018 IFT27Q9BW83 186 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 ABCB9Q9NP78 766 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 CACNA1HO95180 2353 aa11.83□□□□□ -0.52
SCAF11-209ENST00000547018 IGHV1OR15-9A0A0B4J2B8 117 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 A0A1W2PRQ8 180 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 FAM171A2A8MVW0 826 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 THY1P04216 161 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 CLEC2LP0C7M8 214 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 BCKDHBP21953 392 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 SMSP52788 366 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 CDH11P55287 796 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 OR8H2Q8N162 312 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 PHF7Q9BWX1 381 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 HDHD5Q9BXW7 423 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 SLC7A5P2Q9GIP4 190 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ZSCAN32Q9NX65 697 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ERVK13-1Q9NX77 482 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 LIPT1Q9Y234 373 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 A0A1W2PPK0 400 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 CSO75390 466 aaKnown RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 GPX5O75715 221 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 SNX4O95219 450 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 CLUP10909 449 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 HPGDP15428 266 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 POU6F2P78424 691 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 MORN4Q8NDC4 146 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 SLC38A2Q96QD8 506 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 PRTFDC1Q9NRG1 225 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ENOPH1Q9UHY7 261 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 FBXL4Q9UKA2 621 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 TMEM184BQ9Y519 407 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 HS3ST3A1Q9Y663 406 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 NUDT14O95848 222 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 CELP19835 753 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 C1DQ13901 141 aaKnown RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 KIR2DS5Q14953 304 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 OR1Q1Q15612 314 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 TAB1Q15750 504 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 RNF44Q7L0R7 432 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 SLC46A3Q7Z3Q1 461 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 ZNF321PQ8N8H1 164 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 DYNC2LI1Q8TCX1 351 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 LRIT1Q9P2V4 623 aa11.82□□□□□ -0.52
SCAF11-209ENST00000547018 RPL36Q9Y3U8 105 aaKnown RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 TP53BP1Q12888 1972 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-209ENST00000547018 PSMD9O00233 223 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 CYR61O00622 381 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 PLD2O14939 933 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 TBX19O60806 448 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 DLGAP3O95886 979 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 HBQ1P09105 142 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 BMP7P18075 431 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 EMDP50402 254 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 HCCSP53701 268 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 UBE2IP63279 158 aaKnown RBP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 IFITM3Q01628 133 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 ZNF404Q494X3 552 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 CRTC2Q53ET0 693 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 SLX4IPQ5VYV7 408 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 RCBTB1Q8NDN9 531 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 FAM83FQ8NEG4 500 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 DTNBP1Q96EV8 351 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 TRMT61AQ96FX7 289 aaKnown RBP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 ZNF582Q96NG8 517 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 PCOLCE2Q9UKZ9 415 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 A0A1B0GVT2 93 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 TGFBR3LH3BV60 316 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 CDRT1O95170 752 aa11.81□□□□□ -0.52
SCAF11-209ENST00000547018 CSTF2P33240 577 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCAF11-209ENST00000547018 FAM53BQ14153 422 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms