RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 HERV-K104P61576 105 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 EMX2Q04743 252 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MXD1Q05195 221 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GALEQ14376 348 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MAD2L1BPQ15013 274 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 FAM131AQ6UXB0 335 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SLC44A3Q8N4M1 653 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 KLHL36Q8N4N3 616 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DENND6BQ8NEG7 585 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ERVMER34-1Q9H9K5 563 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 THAP10Q9P2Z0 257 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MKLN1Q9UL63 735 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ERVK-19Q9WJR5 959 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 OARD1Q9Y530 152 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 J3QLW9 94 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 RAD51DO75771 328 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 LCKP06239 509 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 RAP2AP10114 183 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF19P17023 458 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CR2P20023 1033 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 LHCGRP22888 699 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CD40LGP29965 261 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 SDC2P34741 201 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 MAGEA3P43357 314 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PPP5CP53041 499 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CSNK2A1P68400 391 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
CLIP1-218ENST00000545889 MESP2Q0VG99 397 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 AGAP6Q5VW22 663 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PAMR1Q6UXH9 720 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PDZD3Q86UT5 571 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CBARPQ8N350 705 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-218ENST00000545889 SVOPLQ8N434 492 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 OR52P1PQ8NH57 321 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 DIRAS2Q96HU8 199 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TXNDC15Q96J42 360 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 AGAP4Q96P64 663 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ANKRD60Q9BZ19 345 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ENKD1Q9H0I2 346 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 EPHX3Q9H6B9 360 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 LTB4R2Q9NPC1 389 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 NUFIP1Q9UHK0 495 aaKnown RBP8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ANTXRLA6NF34 631 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ARGFXA6NJG6 315 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 C4orf47A7E2U8 309 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF432O94892 652 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PDGFAP04085 211 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 RLN2P04090 185 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CSN2P05814 226 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CTRB1P17538 263 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 STARP49675 285 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CDH11P55287 796 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 SIRPAP78324 504 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 KCNC4Q03721 635 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ERV3-1Q14264 604 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ALG10BQ5I7T1 473 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 NDUFAF5Q5TEU4 345 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CTRB2Q6GPI1 263 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF773Q6PK81 442 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 NXPE2Q96DL1 559 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 SGTBQ96EQ0 304 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TCTN2Q96GX1 697 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CHCHD6Q9BRQ6 235 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 DNAJB9Q9UBS3 223 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF639Q9UID6 485 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PDE10AQ9Y233 779 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 A0A0G2JPF8 293 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 HNRNPCL3B7ZW38 293 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 L7N2F9 121 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TNFSF15O95150 251 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 C1SP09871 688 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 HNRNPCL4P0DMR1 293 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 OPRD1P41143 372 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 EIF2DP41214 584 aaKnown RBP8.09□□□□□ -1.11
CLIP1-218ENST00000545889 VAMP2P63027 116 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 GAS6Q14393 721 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CES4AQ5XG92 561 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM184AQ6ZMB5 413 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TIFABQ6ZNK6 161 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CARM1Q86X55 608 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PLCZ1Q86YW0 608 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ANKRD53Q8N9V6 530 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 OR13H1Q8NG92 308 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 NDNFQ8TB73 568 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 SNX18Q96RF0 628 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 TRIB3Q96RU7 358 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF382Q96SR6 550 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ADOQ96SZ5 270 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 HINT2Q9BX68 163 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF222Q9UK12 451 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 PRSS21Q9Y6M0 314 aa8.09□□□□□ -1.11
CLIP1-218ENST00000545889 CHP2O43745 196 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 ARL6IP5O75915 188 aa8.09□□□□□ -1.12
CLIP1-218ENST00000545889 LCATP04180 440 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms