RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SNRPD1P62314 119 aaKnown RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 HERVK_113P63132 956 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ERVK-8P63133 956 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MRPS6P82932 125 aaKnown RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 SPIBQ01892 262 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 IL24Q13007 206 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ENPP2Q13822 863 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 CCL14Q16627 93 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 PDK4Q16654 411 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 KNOP1Q1ED39 458 aaKnown RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 DCAF4L1Q3SXM0 396 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 LINC01620Q4KN68 170 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF311Q5JNZ3 666 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 WDR25Q64LD2 544 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF562Q6V9R5 426 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 NOTCH2NLQ7Z3S9 236 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 NR2C2APQ86WQ0 139 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 FAM131BQ86XD5 332 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 CCDC36Q8IYA8 594 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 DDHD1Q8NEL9 900 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 OR1K1Q8NGR3 316 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 C11orf52Q96A22 123 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 PINX1Q96BK5 328 aaKnown RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ERVK-6Q9BXR3 956 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 RPAP3Q9H6T3 665 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 PLCXD1Q9NUJ7 323 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MBD2Q9UBB5 411 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 HPCAL4Q9UM19 191 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MTCH2Q9Y6C9 303 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 IKBKGQ9Y6K9 419 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ZDBF2Q9HCK1 2354 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 SPTBN4Q9H254 2564 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 LRRC37A2A6NM11 1700 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 CHD9Q3L8U1 2897 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 MEIOCA2RUB1 952 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 TMCO5BA8MYB1 307 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 NPIPA2E9PIF3 369 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FAM72CH0Y354 149 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 H3BTX0 84 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 K7EQM0 130 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ALOX15BO15296 676 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 MAGEB3O15480 346 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 GPRIN2O60269 458 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 DUSP11O75319 330 aaKnown RBP3.41□□□□□ -1.86
SNHG1-222ENST00000545308 HMMRO75330 724 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 MTX2O75431 263 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 NEBLO76041 1014 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 TM7SF2O76062 418 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZFAND5O76080 213 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 SNX4O95219 450 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OPN1MWP04001 364 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OPN1MW2P0DN77 364 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OPN1MW3P0DN78 364 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 RPA2P15927 270 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 AOC1P19801 751 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 PDHA2P29803 388 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 PBLDP30039 288 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FCGR2CP31995 323 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ACLYP53396 1101 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 CRYBA2P53672 197 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 NUCB2P80303 420 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 SRYQ05066 204 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZP4Q12836 540 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 HLA-BQ31612 363 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 POM121L1PQ3SYA9 428 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 UNC50Q53HI1 259 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 CFAP157Q5JU67 520 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 RABGAP1LQ5R372 815 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 SPATA46Q5T0L3 261 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FAM72AQ5TYM5 149 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 DMKNQ6E0U4 476 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-222ENST00000545308 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FAM72DQ6L9T8 149 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 C3P1Q6ZMU1 363 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF841Q6ZN19 808 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 P4HA3Q7Z4N8 544 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 VPS36Q86VN1 386 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 RANBP3LQ86VV4 465 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-222ENST00000545308 KCNMB4Q86W47 210 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FAM72BQ86X60 149 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 EFCAB13Q8IY85 973 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZCCHC7Q8N3Z6 543 aaKnown RBP3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZNRF1Q8ND25 227 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ICA1LQ8NDH6 482 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 STEAP2Q8NFT2 490 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OR4F17Q8NGA8 305 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OR10G7Q8NGN6 311 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF519Q8TB69 540 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 FBXO25Q8TCJ0 367 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 MRGPRDQ8TDS7 321 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ADIPOR1Q96A54 375 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 HPDLQ96IR7 371 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 OR4F4Q96R69 305 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 TNFRSF13CQ96RJ3 184 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF607Q96SK3 696 aa3.41□□□□□ -1.86
SNHG1-222ENST00000545308 CPXM1Q96SM3 734 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms