RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 HMGN2P46Q86SG4 172 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 RBM45Q8IUH3 476 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 LACC1Q8IV20 430 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 METTL27Q8N6F8 245 aaPredicted RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 OR4K5Q8NGD3 323 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 OR4D11Q8NGI4 311 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 CNIH3Q8TBE1 160 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 PIGXQ8TBF5 258 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 IPCEF1Q8WWN9 437 aaPredicted RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 NIPSNAP1Q9BPW8 284 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 LMF2Q9BU23 707 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 G6PC3Q9BUM1 346 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 CNPPD1Q9BV87 410 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 DGCR6LQ9BY27 220 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 RBM38Q9H0Z9 239 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 ZNF768Q9H5H4 540 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 FOLH1BQ9HBA9 442 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 Q9N2J8 555 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 RASSF1Q9NS23 344 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 C14orf105Q9NVL8 296 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 RLIMQ9NVW2 624 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 PRODH2Q9UF12 536 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 RSL24D1Q9UHA3 163 aaKnown RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 MKLN1Q9UL63 735 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 A4GNTQ9UNA3 340 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 SRPK3Q9UPE1 567 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 PCDHGA6Q9Y5G7 932 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 HEMK1Q9Y5R4 338 aaPredicted RBP6.53□□□□□ -1.36
SPPL3-209ENST00000545209 COMMD3-BMI1R4GMX3 469 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 EML5Q05BV3 1969 aa6.53□□□□□ -1.36
SPPL3-209ENST00000545209 CCDC88CQ9P219 2028 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 TP53BP1Q12888 1972 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CPSF4LA6NMK7 179 aaKnown RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ZAR1LA6NP61 321 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 A8MU76 341 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 PTGES3LE9PB15 166 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 E9PQ18 207 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 H3BN98 237 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF701M0R085 212 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 RGS10O43665 173 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 HYAL3O43820 417 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 BRINP1O60477 761 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 FCMRO60667 390 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 FMO6PO60774 539 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 FBXO24O75426 580 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CYP7B1O75881 506 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 OR6B1O95007 311 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MED26O95402 600 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CPNE6O95741 557 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 EPPINO95925 133 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 GASTP01350 101 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ANKRD34CP0C6C1 535 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 GIMD1P0DJR0 217 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 POU2F1P14859 743 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 FOLR1P15328 257 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MAOAP21397 527 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 AGXTP21549 392 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 RPS4Y1P22090 263 aaKnown RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CHMP24386 653 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 POU1F1P28069 291 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 EPHA2P29317 976 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 TRHRP34981 398 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 KRT20P35900 424 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MAP3K8P41279 467 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 GSSP48637 474 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 DUSP3P51452 185 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 PGDP52209 483 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CRISP1P54107 249 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 EEF1A1P68104 462 aaKnown RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 BTG2P78543 158 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ACY1Q03154 408 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MVKQ03426 396 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 SQSTM1Q13501 440 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 COL9A2Q14055 689 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 SEC23BQ15437 767 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 NPTX1Q15818 432 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CLPPQ16740 277 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-209ENST00000545209 SYT16Q17RD7 645 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CCNJQ5T5M9 372 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ARHGAP40Q5TG30 622 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 PGBD2Q6P3X8 592 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 TMEM71Q6P5X7 295 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 KLHL17Q6TDP4 642 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 CD300LDQ6UXZ3 194 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF836Q6ZNA1 936 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 MED25Q71SY5 747 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 KANSL1Q7Z3B3 1105 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 COMTD1Q86VU5 262 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 GATAD2AQ86YP4 633 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ENTHD1Q8IYW4 607 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 FAM181AQ8N9Y4 354 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF540Q8NDQ6 660 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 OR7G1Q8NGA0 311 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 OR4D9Q8NGE8 314 aa6.52□□□□□ -1.37
SPPL3-209ENST00000545209 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms