RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TEX37Q96LM6 180 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 OR52E6Q96RD3 313 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 TRIB1Q96RU8 372 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 PIGQQ9BRB3 760 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 ACBD3Q9H3P7 528 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 CALHM2Q9HA72 323 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 DNAJC13O75165 2243 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 B4DXG7 233 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 H3BNH8 94 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF195O14628 629 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 UBDO15205 165 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 GMFGO60234 142 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 SLC22A3O75751 556 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 TGDSO95455 350 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 AGR2O95994 175 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 AK1P00568 194 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 IL2RAP01589 272 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 PEPDP12955 493 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 TIMP3P35625 211 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 CHI3L1P36222 383 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-216ENST00000544996 STARP49675 285 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 LHX2P50458 406 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 DGKQP52824 942 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
CCDC78-216ENST00000544996 PHC1P78364 1004 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 BCL2A1Q16548 175 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 GLYR1Q49A26 553 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-216ENST00000544996 FLYWCH1Q4VC44 716 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 PDCD4Q53EL6 469 aaKnown RBP14.25□□□□□ -0.13
CCDC78-216ENST00000544996 ATAD3BQ5T9A4 648 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 MAVSQ7Z434 540 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 CLEC4FQ8N1N0 589 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 GATSQ8NAP1 163 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 OR5D16Q8NGK9 328 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 CCDC115Q96NT0 180 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 PANX1Q96RD7 426 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 EXD2Q9NVH0 621 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 KCNE3Q9Y6H6 103 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 NCKAP5O14513 1909 aa14.25□□□□□ -0.13
CCDC78-216ENST00000544996 NCOA6Q14686 2063 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 A0A087WZY1 265 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 A0A1W2PQD3 144 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 NKX2-6A6NCS4 301 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 C19orf84I3L1E1 186 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 DVL2O14641 736 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 POLR3GO15318 223 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 IL6P05231 212 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SNRPB2P08579 225 aaKnown RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF708P17019 499 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 POU3F2P20265 443 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 B3GALT5-AS1P59052 145 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SLC25A35Q3KQZ1 300 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 EPGNQ6UW88 154 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SEM1Q6ZVN7 128 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 CHMP1BQ7LBR1 199 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 C16orf62Q7Z3J2 963 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 MTERF4Q7Z6M4 381 aaKnown RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 TNIP2Q8NFZ5 429 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 MIPOL1Q8TD10 442 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 OR52B2Q96RD2 323 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SPOCK3Q9BQ16 436 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SLC35A5Q9BS91 424 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SLCO1B3Q9NPD5 702 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 SDR39U1Q9NRG7 319 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-216ENST00000544996 ZIM2Q9NZV7 527 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 STOML1Q9UBI4 398 aa14.24□□□□□ -0.13
CCDC78-216ENST00000544996 MBD3L4A6NDZ8 208 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MBD3L3A6NE82 208 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 CCDC154A6NI56 674 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MBD3L5A6NJ08 208 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 C9JVG2 144 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 HCRTR2O43614 444 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 STX11O75558 287 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 TOXO94900 526 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 IL12AP29459 219 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 CEACAM8P31997 349 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF41P51814 821 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 ATP12AP54707 1039 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 CLDN18P56856 261 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 EEFSECP57772 596 aaKnown RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 KLHL26Q53HC5 615 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF621Q6ZSS3 439 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MIER2Q8N344 545 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MEIOBQ8N635 442 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 CHDHQ8NE62 594 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 B4GALNT2Q8NHY0 566 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MBD3L2Q8NHZ7 208 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 PHOSPHO1Q8TCT1 267 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 NEURL3Q96EH8 262 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-216ENST00000544996 MARK4Q96L34 752 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 SDF2Q99470 211 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 TM9SF2Q99805 663 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 TUBA1CQ9BQE3 449 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 OR51I1Q9H343 314 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 SERHL2Q9H4I8 314 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 TCF7L2Q9NQB0 619 aa14.23□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF629Q9UEG4 869 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms