RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 FBXL3Q9UKT7 428 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SCAMP2O15127 329 aaKnown RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 TFP02787 698 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 KLKB1P03952 638 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 ACAA1P09110 424 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 RNF224P0DH78 156 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 OSMP13725 252 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 GRPRP30550 384 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MORN1Q5T089 497 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 PODNL1Q6PEZ8 512 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 DDX53Q86TM3 631 aaKnown RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 TRAPPC5Q8IUR0 188 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 CD99L2Q8TCZ2 262 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SPHK1Q9NYA1 384 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SLC6A5Q9Y345 797 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 CHST2Q9Y4C5 530 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 NPIPB15A6NHN6 443 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SELENOFO60613 162 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 LGI1O95970 557 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 NOS3P29474 1203 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SELENOPP49908 381 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 HCCSP53701 268 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 AP1S1P61966 158 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 HFEQ30201 348 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 ZNF628Q5EBL2 1059 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 AGTRAPQ6RW13 159 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 Q6ZVL8 140 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 NDUFAF7Q7L592 441 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 CEACAM19Q7Z692 300 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 WFDC5Q8TCV5 224 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 HGDQ93099 445 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 RAD51AP1Q96B01 352 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 CPNE2Q96FN4 548 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 OR4K3Q96R72 315 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 PTDSS2Q9BVG9 487 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 RNF32Q9H0A6 362 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 PPP1R3EQ9H7J1 279 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 DDX31Q9H8H2 851 aaKnown RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 EVA1AQ9H8M9 152 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 PRMT8Q9NR22 394 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 POMT2Q9UKY4 750 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SLC45A1Q9Y2W3 748 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 Q9Y3F1 56 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 H3BNC9 293 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SOCS6O14544 535 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 ARPC1BO15143 372 aaKnown RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 MPZL2O60487 215 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 C8GP07360 202 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SMIM6P0DI80 62 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 PDHA2P29803 388 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 ASMTP46597 345 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 KCNJ3P48549 501 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 MTAPQ13126 283 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 SYT14P1Q58G82 188 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 COMMD6Q7Z4G1 85 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 HORMAD2Q8N7B1 307 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 NANOGP1Q8N7R0 232 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 ZNF707Q96C28 371 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 PAPOLGQ9BWT3 736 aaKnown RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 OR51I1Q9H343 314 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 DLL4Q9NR61 685 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 GPATCH2Q9NW75 528 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 LHX3Q9UBR4 397 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 ZNF282Q9UDV7 671 aaPredicted RBP12.03□□□□□ -0.48
PDZD4-209ENST00000544474 GPR160Q9UJ42 338 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 GTF2A1LQ9UNN4 478 aa12.03□□□□□ -0.48
PDZD4-209ENST00000544474 FFAR1O14842 300 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 COCHO43405 550 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 STC2O76061 302 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 TCRBP04435 133 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 CKMP06732 381 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 SRPRAP08240 638 aaKnown RBP12.02□□□□□ -0.48
PDZD4-209ENST00000544474 H2AFB2P0C5Z0 115 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 GIPRP48546 466 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 PGDP52209 483 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 CLDN2P57739 230 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 PUM1Q14671 1186 aaKnown RBP eCLIP12.02□□□□□ -0.48
PDZD4-209ENST00000544474 LASP1Q14847 261 aaKnown RBP12.02□□□□□ -0.48
PDZD4-209ENST00000544474 TCTE1Q5JU00 501 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 OR8J2Q8NGG1 315 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 OR8S1Q8NH09 359 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.48
PDZD4-209ENST00000544474 NEIL2Q969S2 332 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 OR2M2Q96R28 347 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 ABHD1Q96SE0 405 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 CMSS1Q9BQ75 279 aaKnown RBP12.02□□□□□ -0.48
PDZD4-209ENST00000544474 ZDHHC3Q9NYG2 299 aa12.02□□□□□ -0.48
PDZD4-209ENST00000544474 OTOFQ9HC10 1997 aa12.02□□□□□ -0.49
PDZD4-209ENST00000544474 PMS2P1A4D2B8 440 aa12.02□□□□□ -0.49
PDZD4-209ENST00000544474 CBSLP0DN79 551 aa12.02□□□□□ -0.49
PDZD4-209ENST00000544474 PRG2P13727 222 aa12.02□□□□□ -0.49
PDZD4-209ENST00000544474 GNSP15586 552 aa12.02□□□□□ -0.49
PDZD4-209ENST00000544474 GABRB1P18505 474 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms