RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SOCS6O14544 535 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 RAD1O60671 282 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 TPST2O60704 377 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 KRT20P35900 424 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 STAT5AP42229 794 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 RNF144AP50876 292 aaPredicted RBP28.04■■■□□ 2.08
CCM2-219ENST00000544363 PLCXD2Q0VAA5 305 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 DNASE1L3Q13609 305 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 FGFBP1Q14512 234 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 SSPNQ14714 243 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 ZSWIM7Q19AV6 140 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 EXOC3L2Q2M3D2 409 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 PIK3C3Q8NEB9 887 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 NAF1Q96HR8 494 aaKnown RBP28.04■■■□□ 2.08
CCM2-219ENST00000544363 IMMP1LQ96LU5 166 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 LIN28AQ9H9Z2 209 aaKnown RBP28.04■■■□□ 2.08
CCM2-219ENST00000544363 UBQLN4Q9NRR5 601 aa28.04■■■□□ 2.08
CCM2-219ENST00000544363 C21orf140B9A014 251 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 STMND1H3BQB6 276 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 TSPAN2O60636 221 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 ZFAND5O76080 213 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 H1F0P07305 194 aaKnown RBP28.03■■■□□ 2.08
CCM2-219ENST00000544363 FUT4P22083 530 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 ABCD3P28288 659 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 IL12BP29460 328 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 SMIM11AP58511 58 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 GRAMD2AQ8IUY3 354 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 GALNT15Q8N3T1 639 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 OR11G2Q8NGC1 345 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 NR4A3Q92570 626 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 OMA1Q96E52 524 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 ADOQ96SZ5 270 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 OSBPL11Q9BXB4 747 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 GPR87Q9BY21 358 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 SMPD3Q9NY59 655 aaPredicted RBP28.03■■■□□ 2.08
CCM2-219ENST00000544363 AP3D1O14617 1153 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 UTS2O95399 124 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 NRG3P56975 720 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 EXT1Q16394 746 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 BTBD16Q32M84 506 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 NHSL2Q5HYW2 709 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 ANKRD34AQ69YU3 496 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 TSPYL5Q86VY4 417 aaPredicted RBP28.03■■■□□ 2.08
CCM2-219ENST00000544363 CMIPQ8IY22 773 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 ELP5Q8TE02 316 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 GIPC3Q8TF64 312 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 FNDC11Q9BVV2 318 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 FAM117AQ9C073 453 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 AP4B1Q9Y6B7 739 aa28.03■■■□□ 2.08
CCM2-219ENST00000544363 TMEM200CA6NKL6 621 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 ABCB7O75027 752 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 DLSTP36957 453 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 ZNF136P52737 540 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 HOXC5Q00444 222 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 PLAURQ03405 335 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 MICAQ29983 383 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 KLHL26Q53HC5 615 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 NDUFAF7Q7L592 441 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 PPP1R32Q7Z5V6 425 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 TAGAPQ8N103 731 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 ZNF527Q8NB42 609 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 THAP3Q8WTV1 239 aaPredicted RBP28.02■■■□□ 2.08
CCM2-219ENST00000544363 ALPK1Q96QP1 1244 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 MCHR1Q99705 422 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 PRR14Q9BWN1 585 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 FLRT3Q9NZU0 649 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 LRCH1Q9Y2L9 728 aa28.02■■■□□ 2.08
CCM2-219ENST00000544363 SERINC4A6NH21 518 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 TERTO14746 1132 aaKnown RBP28.01■■■□□ 2.07
CCM2-219ENST00000544363 BCAS1O75363 584 aaPredicted RBP28.01■■■□□ 2.07
CCM2-219ENST00000544363 CYP4B1P13584 511 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 PNLIPRP2P54317 469 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 C6orf52Q5T4I8 152 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 PLAG1Q6DJT9 500 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 RANBP3LQ86VV4 465 aaPredicted RBP28.01■■■□□ 2.07
CCM2-219ENST00000544363 M1APQ8TC57 530 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 CNOT9Q92600 299 aaKnown RBP28.01■■■□□ 2.07
CCM2-219ENST00000544363 Q9H521 79 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 FAM186AA6NE01 2351 aa28.01■■■□□ 2.07
CCM2-219ENST00000544363 HS6ST1O60243 411 aa28■■■□□ 2.07
CCM2-219ENST00000544363 GKN3PP0CG01 181 aa28■■■□□ 2.07
CCM2-219ENST00000544363 TBXA2RP21731 343 aa28■■■□□ 2.07
CCM2-219ENST00000544363 CD82P27701 267 aa28■■■□□ 2.07
CCM2-219ENST00000544363 RBMS1P29558 406 aaKnown RBP28■■■□□ 2.07
CCM2-219ENST00000544363 TAS2R41P59536 307 aa28■■■□□ 2.07
CCM2-219ENST00000544363 ENTPD8Q5MY95 495 aa28■■■□□ 2.07
CCM2-219ENST00000544363 TMPRSS7Q7RTY8 843 aa28■■■□□ 2.07
CCM2-219ENST00000544363 OFCC1Q8IZS5 231 aa28■■■□□ 2.07
CCM2-219ENST00000544363 RDH12Q96NR8 316 aa28■■■□□ 2.07
CCM2-219ENST00000544363 CTPS2Q9NRF8 586 aa28■■■□□ 2.07
CCM2-219ENST00000544363 DNAJB12Q9NXW2 375 aaKnown RBP28■■■□□ 2.07
CCM2-219ENST00000544363 A0A1W2PRQ8 180 aa28■■■□□ 2.07
CCM2-219ENST00000544363 CPSF4LA6NMK7 179 aaKnown RBP28■■■□□ 2.07
CCM2-219ENST00000544363 OXSR1O95747 527 aaPredicted RBP28■■■□□ 2.07
CCM2-219ENST00000544363 THRBP10828 461 aa28■■■□□ 2.07
CCM2-219ENST00000544363 HPGDP15428 266 aa28■■■□□ 2.07
CCM2-219ENST00000544363 F8A1P23610 371 aa28■■■□□ 2.07
CCM2-219ENST00000544363 ELAVL4P26378 380 aaKnown RBP28■■■□□ 2.07
CCM2-219ENST00000544363 OTX2P32243 289 aa28■■■□□ 2.07
CCM2-219ENST00000544363 DAPP51397 102 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms